RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 KMT2EQ8IZD2 1858 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 CSPG4Q6UVK1 2322 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 FOXL1Q12952 345 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 FBXL15Q9H469 300 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 K7EN84 100 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 HYPMO75409 117 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 HIST1H1EP10412 219 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 MSMPQ1L6U9 139 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 SRRM4A7MD48 611 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 BSPH1Q075Z2 132 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 SLC25A15Q9Y619 301 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 PMS2P5A8MQ11 134 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 ISLRO14498 428 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 NUTF2P61970 127 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 COL5A1-AS1Q5SY13 56 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 PERPQ96FX8 193 aa13.23□□□□□ -0.29
PDZRN3-201ENST00000263666 J3KRW8 73 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 ZNF138P52744 262 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 OR4C5Q8NGB2 326 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 PEX7O00628 323 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 OR4C13Q8NGP0 309 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 SLC25A33Q9BSK2 321 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 FA2HQ7L5A8 372 aa13.22□□□□□ -0.29
PDZRN3-201ENST00000263666 MT-ND6P03923 174 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 NBEAP1P0C6P0 100 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 Q6ZVH6 145 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 RASL11BQ9BPW5 248 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 FBXL7Q9UJT9 491 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 ARHGAP32A7KAX9 2087 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 CD69Q07108 199 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 BET1LQ9NYM9 111 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 GGTLC3B5MD39 225 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 C1orf194Q5T5A4 169 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
PDZRN3-201ENST00000263666 CORTO00230 105 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 ARF6P62330 175 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 PRCDQ00LT1 54 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 ZNF596Q8TC21 504 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 SRSF12Q8WXF0 261 aaKnown RBP13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 RCHY1Q96PM5 261 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 UBTD1Q9HAC8 227 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 MSRB2Q9Y3D2 182 aa13.21□□□□□ -0.3
PDZRN3-201ENST00000263666 FAM168AQ92567 244 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 LY6HO94772 140 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 OR5AL1P0C617 328 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 LYPD2Q6UXB3 125 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 MIEN1Q9BRT3 115 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 K7EQM0 130 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 CD99P14209 185 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 MORN5Q5VZ52 161 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 Q6ZS92 163 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 WFDC3Q8IUB2 231 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 PLSCR4Q9NRQ2 329 aa13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
PDZRN3-201ENST00000263666 UQCRFS1P47985 274 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 VPS25Q9BRG1 176 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 UQCR10Q9UDW1 63 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 BMPR1BO00238 502 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 MAJINQ3KP22 176 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 C17orf58Q2M2W7 97 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 TPSG1Q9NRR2 321 aa13.19□□□□□ -0.3
PDZRN3-201ENST00000263666 M0QZK8 103 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 TNFSF13O75888 250 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 LBHQ53QV2 105 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 OR8B3Q8NGG8 313 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 C3orf79P0CE67 100 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 C2orf88Q9BSF0 95 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 GNG7O60262 68 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 LOXL3P58215 753 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 HIGD1AQ9Y241 93 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 A8MWL6 223 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 FXYD7P58549 80 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 KCNS1Q96KK3 526 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms