RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 MS4A6AQ9H2W1 248 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
SCARF1-201ENST00000263071 TIMM9Q9Y5J7 89 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
SCARF1-201ENST00000263071 WISP2O76076 250 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 TBC1D28Q2M2D7 210 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 C8orf86Q6ZUL3 223 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 WDR86Q86TI4 376 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 NDFIP1Q9BT67 221 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
SCARF1-201ENST00000263071 PLXNB1O43157 2135 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 TMPRSS3P57727 454 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
SCARF1-201ENST00000263071 PSG7Q13046 419 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 TIMM23BQ5SRD1 257 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 GPR82Q96P67 336 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 J3QT63 122 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 MPV17P39210 176 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 CATR1Q13166 79 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 TRIB1Q96RU8 372 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 NKX2-8O15522 239 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 TCTAP57738 103 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 RPL31P62899 125 aaKnown RBP11.67□□□□□ -0.54
SCARF1-201ENST00000263071 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 FAM173AQ9BQD7 235 aa11.67□□□□□ -0.54
SCARF1-201ENST00000263071 SMG1Q96Q15 3661 aaKnown RBP11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 GPR12P47775 334 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 LINC00473A8K010 186 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 IGLV2-14P01704 120 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 COX8AP10176 69 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 VGLL1Q99990 258 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ARRDC1-AS1Q9H2J1 176 aa11.66□□□□□ -0.54
SCARF1-201ENST00000263071 ADGRG4Q8IZF6 3080 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 LRRC30A6NM36 301 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 K7EN84 100 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
SCARF1-201ENST00000263071 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 OR13A1Q8NGR1 328 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 SPANXB1Q9NS25 103 aaPredicted RBP11.65□□□□□ -0.54
SCARF1-201ENST00000263071 SMIM13P0DJ93 91 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 CCL11P51671 97 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 FOXI2Q6ZQN5 318 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 C1QTNF4Q9BXJ3 329 aa11.65□□□□□ -0.54
SCARF1-201ENST00000263071 RNASE7Q9H1E1 156 aaKnown RBP11.65□□□□□ -0.54
SCARF1-201ENST00000263071 CLDN14O95500 239 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 ZNRF1Q8ND25 227 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 PKIBQ9C010 78 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 HES4Q9HCC6 221 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 POLDIP2Q9Y2S7 368 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 CGAP01215 116 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 APELAP0DMC3 54 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 IGF2-ASQ6U949 168 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 LINC00173Q6ZV60 143 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 RAB1CQ92928 201 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 MPC1Q9Y5U8 109 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 V9GYV3 84 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
SCARF1-201ENST00000263071 TMEM30CPA0ZSE6 113 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 RRHO14718 337 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
SCARF1-201ENST00000263071 CAMPP49913 170 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 MFAP2P55001 183 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 TIGITQ495A1 244 aa11.64□□□□□ -0.55
SCARF1-201ENST00000263071 EXPH5Q8NEV8 1989 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 A1L4Q6 167 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 REG1BP48304 166 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 FAM162BQ5T6X4 162 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 C2orf91Q6ZV80 131 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 SPACA3Q8IXA5 215 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 Q6P435 159 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 C20orf78Q9BR46 151 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 SPENQ96T58 3664 aaKnown RBP11.63□□□□□ -0.55
SCARF1-201ENST00000263071 OR9G9P0C7N8 305 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 Q6ZR03 302 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 MOB3BQ86TA1 216 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
SCARF1-201ENST00000263071 PCNX2A6NKB5 2137 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 F8W1H4 67 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 MT-ATP8P03928 68 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 VWC2Q2TAL6 325 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 LRRC29Q8WV35 223 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
SCARF1-201ENST00000263071 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms