RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TMEM186Q96B77 213 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
PRPF40B-201ENST00000261897 IGHV1-24A0A0C4DH33 117 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 FAM87AP0C7U9 286 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 LYZP61626 148 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 HARBI1Q96MB7 349 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 ST20Q9HBF5 79 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 Q6ZSR3 168 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 MBNL3Q9NUK0 354 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 LTBRP36941 435 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 MEF2CQ06413 473 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 ACP7Q6ZNF0 438 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 LINC00305Q7Z4B0 112 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 OR4F17Q8NGA8 305 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 ADTRPQ96IZ2 230 aa13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 UBE2ZQ9H832 354 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-201ENST00000261897 CSN1S1P47710 185 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 GRAMD2BQ96HH9 432 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 TTTY12Q9BZ98 90 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 ADH4P08319 380 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 ESDP10768 282 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 DCHS1Q96JQ0 3298 aa13.04□□□□□ -0.32
PRPF40B-201ENST00000261897 LIPFP07098 398 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 TRBV6-6A0A0A6YYG2 114 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 A0A0G2JLM5 398 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 FABP2P12104 132 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 CACNG7P62955 275 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 Q0VFX4 171 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 MORN2Q502X0 79 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 Q8TCH9 128 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 IGKV1-16P04430 117 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 PRSS1P07477 247 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 MEOX1P50221 254 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 ZNF134P52741 427 aa13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 HIST1H1AQ02539 215 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-201ENST00000261897 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.32
PRPF40B-201ENST00000261897 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.32
PRPF40B-201ENST00000261897 KIR3DS1Q14943 382 aa13.02□□□□□ -0.32
PRPF40B-201ENST00000261897 OR4A5Q8NH83 315 aa13.02□□□□□ -0.32
PRPF40B-201ENST00000261897 CALYQ9NYX4 217 aa13.02□□□□□ -0.32
PRPF40B-201ENST00000261897 SRFP11831 508 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 SSBP2P81877 361 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 PLGLAQ15195 96 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 ZNF788Q6ZQV5 615 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 DEFB125Q8N687 156 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 CXXC4Q9H2H0 198 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 ZNF146Q15072 292 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 C5orf17Q8NAS9 161 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 S4R3C0 116 aa13.02□□□□□ -0.33
PRPF40B-201ENST00000261897 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 RBP4P02753 201 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 ACP1P24666 158 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 IL11RAQ14626 422 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 TIMM23BQ5SRD1 257 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 Q8N7P7 452 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 MRPL27Q9P0M9 148 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 PTPRSQ13332 1948 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 H0YJW9 148 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 CYC1P08574 325 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 CCL13Q99616 98 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 SLC25A33Q9BSK2 321 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 TTTY13Q9BZ97 58 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 IGKV1OR2-108A0A075B7D4 117 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 A1L4Q6 167 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 CIDEAO60543 219 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 PAX2Q02962 417 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 ATP1A1-AS1Q5TC04 95 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
PRPF40B-201ENST00000261897 CD5LO43866 347 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 MMP23AO75900 390 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 CD177Q8N6Q3 437 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 OR10X1Q8NGY0 326 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 JKAMPQ9P055 326 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
PRPF40B-201ENST00000261897 SMIM27A0A1W2PRY6 76 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 M0R1B8 84 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 PROP1O75360 226 aa13□□□□□ -0.33
PRPF40B-201ENST00000261897 TNRC6AQ8NDV7 1962 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 PPIAL4CA0A0B4J2A2 164 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 IGLV3-19P01714 112 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 DUX4L9Q6RFH8 374 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 C6orf15Q6UXA7 325 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 K7ERJ3 54 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms