RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ZNF688P0C7X2 276 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 CD177Q8N6Q3 437 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 CACNA1EQ15878 2313 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
SPG11-201ENST00000261866 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
SPG11-201ENST00000261866 PAX8Q06710 450 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 RNF125Q96EQ8 232 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 DOCK9Q9BZ29 2069 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 CTAG1AP78358 180 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 Q96MF0 132 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 ZSWIM8A7E2V4 1837 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 IL18BPO95998 194 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 KLHL30-AS1Q8NEE0 82 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 PLSCR4Q9NRQ2 329 aa10.07□□□□□ -0.8
SPG11-201ENST00000261866 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
SPG11-201ENST00000261866 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
SPG11-201ENST00000261866 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
SPG11-201ENST00000261866 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
SPG11-201ENST00000261866 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 LURAP1LQ8IV03 231 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 ZNF414Q96IQ9 312 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 M0QZK8 103 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 TIMP3P35625 211 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 LEPP41159 167 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 ZNF581Q9P0T4 197 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 CA1P00915 261 aaPredicted RBP10.06□□□□□ -0.8
SPG11-201ENST00000261866 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 TCF23Q7RTU1 214 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 RNF144BQ7Z419 303 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 IGKV1-12A0A0C4DH73 117 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 LYPD3O95274 346 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 IGKV1D-12P01611 117 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 PRB1P04280 392 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 ACTL10Q5JWF8 245 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 PGPEP1LA6NFU8 196 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 VENTXO95231 258 aa10.06□□□□□ -0.8
SPG11-201ENST00000261866 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 TMEM178BH3BS89 294 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 YPEL1O60688 119 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 CLPSP04118 112 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 LINC00158P58513 81 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 NR2C2APQ86WQ0 139 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 ANK1P16157 1881 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 GZMBP10144 247 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 PAX2Q02962 417 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 SIGLEC15Q6ZMC9 328 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 IGKV1-27A0A075B6S5 117 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 CD8AP01732 235 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 TTC9CQ8N5M4 171 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 IGFBP3P17936 291 aaPredicted RBP10.05□□□□□ -0.8
SPG11-201ENST00000261866 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 C19orf24Q9BVV8 132 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 ATP5LO75964 103 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 HOXA5P20719 270 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 CFHR3Q02985 330 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 FMC1Q96HJ9 113 aa10.05□□□□□ -0.8
SPG11-201ENST00000261866 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 INSP01308 110 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 MT-ND6P03923 174 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 COPS9Q8WXC6 57 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
SPG11-201ENST00000261866 TMEM50AO95807 157 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 S100A7L2Q5SY68 101 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 H7C1H1 209 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 PSPNO60542 156 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 ZNF48Q96MX3 618 aaPredicted RBP10.04□□□□□ -0.8
SPG11-201ENST00000261866 IGHV1-3A0A0C4DH29 117 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 TRAV8-2A0A0B4J237 113 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 UCP1P25874 307 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 SDK2Q58EX2 2172 aa10.04□□□□□ -0.8
SPG11-201ENST00000261866 ADARB2-AS1A8MUL3 147 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 LBHQ53QV2 105 aaPredicted RBP10.03□□□□□ -0.8
SPG11-201ENST00000261866 ZNF474Q6S9Z5 364 aaPredicted RBP10.03□□□□□ -0.8
SPG11-201ENST00000261866 C18orf12Q96KH6 178 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 B4DSR2 109 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 VSIRQ9H7M9 311 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 MDS2Q8NDY4 140 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 GPX4P36969 197 aaPredicted RBP10.03□□□□□ -0.8
SPG11-201ENST00000261866 NABP1Q96AH0 204 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 MSRB2Q9Y3D2 182 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 OR11H12B2RN74 326 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms