RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ZNF502Q8TBZ5 544 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 SAA2-SAA4A0A096LPE2 208 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 SAA2P0DJI9 122 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-201ENST00000261646 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-201ENST00000261646 CACNG8Q8WXS5 425 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 TIMD4Q96H15 378 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 EPDR1Q9UM22 224 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-201ENST00000261646 SPAARA0A1B0GVQ0 90 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 PINLYPA6NC86 204 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 F5H697 171 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 WDR82Q6UXN9 313 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 LHFPL4Q7Z7J7 247 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 C5orf30Q96GV9 206 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 CECR9P0C854 216 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 LHX2P50458 406 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 SMAGPQ0VAQ4 97 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 SOX21Q9Y651 276 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-201ENST00000261646 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 YPEL1O60688 119 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 MYOD1P15172 320 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 YPEL2Q96QA6 119 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 LY96Q9Y6Y9 160 aa13.41□□□□□ -0.26
SREBF1-201ENST00000261646 TICRRQ7Z2Z1 1910 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 IQCF6A8MYZ5 107 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 NKX2-8O15522 239 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 MC5RP33032 325 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 CD69Q07108 199 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 OCIAD2Q56VL3 154 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
SREBF1-201ENST00000261646 IGLV3-1P01715 115 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 OR10W1Q8NGF6 305 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 C18orf32Q8TCD1 76 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 ZNF257Q9Y2Q1 563 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 SH2D7A6NKC9 451 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-201ENST00000261646 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 KLK15Q9H2R5 256 aa13.4□□□□□ -0.26
SREBF1-201ENST00000261646 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 UPK2O00526 184 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 SAA1P0DJI8 122 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-201ENST00000261646 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
SREBF1-201ENST00000261646 SSC4DQ8WTU2 575 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 ETV2O00321 342 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-201ENST00000261646 CACNG7P62955 275 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 FAM216BQ8N7L0 139 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 TMEM105Q8N8V8 129 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 Q9H3A6 140 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 KBTBD11-OT1A0A1B0GTJ5 212 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 SEC11AP67812 179 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
SREBF1-201ENST00000261646 OSR1Q8TAX0 266 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-201ENST00000261646 A0A1B0GWB2 263 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 IGLL1P15814 213 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 RBPJQ06330 500 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 Q6ZT83 130 aa13.39□□□□□ -0.27
SREBF1-201ENST00000261646 NPIPB11E5RHQ5 1161 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 NHP2Q9NX24 153 aaKnown RBP13.38□□□□□ -0.27
SREBF1-201ENST00000261646 KIF26AQ9ULI4 1882 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-201ENST00000261646 BMI1P35226 326 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 MLANAQ16655 118 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 CHCHD1Q96BP2 118 aaKnown RBP13.38□□□□□ -0.27
SREBF1-201ENST00000261646 RCHY1Q96PM5 261 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 TMUB1Q9BVT8 246 aa13.38□□□□□ -0.27
SREBF1-201ENST00000261646 IGHV1-2P23083 117 aa13.37□□□□□ -0.27
SREBF1-201ENST00000261646 PDLIM4P50479 330 aa13.37□□□□□ -0.27
SREBF1-201ENST00000261646 MRPL20Q9BYC9 149 aaKnown RBP13.37□□□□□ -0.27
SREBF1-201ENST00000261646 PRCDQ00LT1 54 aa13.37□□□□□ -0.27
SREBF1-201ENST00000261646 CGB1A6NKQ9 187 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 COQ2Q96H96 371 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 FMC1Q96HJ9 113 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 MS4A6AQ9H2W1 248 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 CCL25O15444 150 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 RPL13AP40429 203 aaKnown RBP13.36□□□□□ -0.27
SREBF1-201ENST00000261646 ORMDL3Q8N138 153 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-201ENST00000261646 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 IL4P05112 153 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 CEACAM8P31997 349 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-201ENST00000261646 ATP5L2Q7Z4Y8 100 aa13.36□□□□□ -0.27
SREBF1-201ENST00000261646 RNASE8Q8TDE3 154 aaKnown RBP13.36□□□□□ -0.27
SREBF1-201ENST00000261646 MGPP08493 103 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 NPPCP23582 126 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 KLK10O43240 276 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 SLAQ13239 276 aa13.35□□□□□ -0.27
SREBF1-201ENST00000261646 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms