RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CD5LO43866 347 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 ACTL6BO94805 426 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 HLA-DRB1P01911 266 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 C8orf88P0DMB2 117 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 MFAP2P55001 183 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 MEF2CQ06413 473 aaPredicted RBP8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 ADIPOQQ15848 244 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 LTC4SQ16873 150 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 C17orf58Q2M2W7 97 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 MPV17L2Q567V2 206 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 RNASEKQ6P5S7 137 aaKnown RBP8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 DDB2Q92466 427 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 VKORC1Q9BQB6 163 aa8.77□□□□□ -1.01
CHRNA1-201ENST00000261007 K7ERU9 68 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 OR7C2O60412 319 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 LDLRAD2Q5SZI1 272 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 GDF5OSQ5U4N7 250 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 SNRNP40Q96DI7 357 aaKnown RBP8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 MS4A6AQ9H2W1 248 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 SVILO95425 2214 aa8.76□□□□□ -1.01
CHRNA1-201ENST00000261007 CBY3A6NI87 242 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 M0QZ24 198 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 BSPH1Q075Z2 132 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 OR4A47Q6IF82 309 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM71F2Q6NXP2 309 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 VKORC1L1Q8N0U8 176 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM168AQ92567 244 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 SLC25A33Q9BSK2 321 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 WASHC3Q9Y3C0 194 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 A0A1B0GXF2 115 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 NUDT3O95989 172 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 THBDP07204 575 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 OR5AL1P0C617 328 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 HIST1H1EP10412 219 aaKnown RBP8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 RPL8P62917 257 aaKnown RBP8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 POU2AF1Q16633 256 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM120AOSQ5T036 256 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 NHLRC2Q8NBF2 726 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 SMIM12Q96EX1 92 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 NUDT11Q96G61 164 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 TMEM191AQ9H0A3 160 aa8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 SOX21Q9Y651 276 aaPredicted RBP8.75□□□□□ -1.01
CHRNA1-201ENST00000261007 PRR14LQ5THK1 2151 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 HSBP1L1C9JCN9 74 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 CA1P00915 261 aaPredicted RBP8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 PSG1P11464 419 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 CT45A1Q5HYN5 189 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 SPATA12Q7Z6I5 190 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 CT45A3Q8NHU0 189 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 URB1-AS1Q96HZ7 61 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 CCL13Q99616 98 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 RPUSD1Q9UJJ7 312 aaKnown RBP8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 ZNF257Q9Y2Q1 563 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 TANC2Q9HCD6 1990 aa8.74□□□□□ -1.01
CHRNA1-201ENST00000261007 PPIAL4EA0A075B759 164 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 PPIAL4DF5H284 164 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 PPIAL4FP0DN26 164 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 CA7P43166 264 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 ZNF134P52741 427 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 RPL39P5Q59GN2 51 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM201AQ5SY85 155 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 SSBP3Q9BWW4 388 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 SCRT2Q9NQ03 307 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 ZNF355PQ9NSJ1 428 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 PEF1Q9UBV8 284 aaKnown RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 AMMECR1Q9Y4X0 333 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 USF3Q68DE3 2245 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 OR2T8A6NH00 312 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 SAA2P0DJI9 122 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 BPIFB3P59826 476 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 CCL8P80075 99 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 C2orf83Q53S99 150 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 SLC25A48Q6ZT89 311 aaKnown RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 KIR3DL3Q8N743 410 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 DEFB108BQ8NET1 73 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 OR2T6Q8NHC8 308 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM167A-AS1Q96KT0 104 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 SH3BGRL2Q9UJC5 107 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 OR51B2Q9Y5P1 312 aa8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 TET2Q6N021 2002 aaPredicted RBP8.73□□□□□ -1.01
CHRNA1-201ENST00000261007 CACNA1DQ01668 2161 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 TMEM178BH3BS89 294 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 PRCDQ00LT1 54 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 FAM216BQ8N7L0 139 aa8.72□□□□□ -1.01
CHRNA1-201ENST00000261007 ZNF714Q96N38 554 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms