RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 BTF3L4Q96K17 158 aa13.25□□□□□ -0.29
UBQLN1-201ENST00000257468 PAXXQ9BUH6 204 aa13.25□□□□□ -0.29
UBQLN1-201ENST00000257468 GSX1Q9H4S2 264 aaPredicted RBP13.25□□□□□ -0.29
UBQLN1-201ENST00000257468 CRYGBP07316 175 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 ORM2P19652 201 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 PRRX1P54821 245 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 TIGITQ495A1 244 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 LINC00305Q7Z4B0 112 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 LDLRAD2Q5SZI1 272 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 TEX45Q8NA69 505 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 OR5R1Q8NH85 324 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 MRPL18Q9H0U6 180 aaKnown RBP13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 FBXL15Q9H469 300 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
UBQLN1-201ENST00000257468 TRAV34A0A0B4J273 112 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 UCNP55089 124 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 MRPL41Q8IXM3 137 aaKnown RBP13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 OR1L4Q8NGR5 311 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 OR1B1Q8NGR6 318 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 TMEM18Q96B42 140 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 FCN1O00602 326 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 COMPP49747 757 aaPredicted RBP13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 BPIFB3P59826 476 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 ADORA2A-AS1P86434 159 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 ST6GALNAC3Q8NDV1 305 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 FXYD5Q96DB9 178 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 RNF2Q99496 336 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
UBQLN1-201ENST00000257468 GCGP01275 180 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 GNG5P63218 68 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 ZNF329Q86UD4 541 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 TNFRSF14Q92956 283 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 RPEQ96AT9 228 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 TEX22C9J3V5 150 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 CRYGCP07315 174 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
UBQLN1-201ENST00000257468 F2Z2F3 143 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 SELENOTP62341 195 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 FBXL19-AS1Q494R0 122 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 IBA57Q5T440 356 aaKnown RBP13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.29
UBQLN1-201ENST00000257468 H3BTX0 84 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 LINC00310P59036 64 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 PKIAP61925 76 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 RANP62826 216 aaKnown RBP13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 BEND2Q8NDZ0 799 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 FAM168AQ92567 244 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 SSBP3Q9BWW4 388 aaPredicted RBP13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 SVEP1Q4LDE5 3571 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
UBQLN1-201ENST00000257468 PEX7O00628 323 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 ISLRO14498 428 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 CD24P25063 80 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 PVRIGQ6DKI7 326 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 CDC42EP3Q9UKI2 254 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 TIMM23O14925 209 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 CD33P20138 364 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 ARF6P62330 175 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 DEFA6Q01524 100 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 KLRD1Q13241 179 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 PLGLAQ15195 96 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 ZNF664Q8N3J9 261 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 SRSF12Q8WXF0 261 aaKnown RBP13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 ABCA1O95477 2261 aa13.19□□□□□ -0.3
UBQLN1-201ENST00000257468 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 LY6LH3BQJ8 138 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 CX3CL1P78423 397 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 HILPDAQ9Y5L2 63 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 F11RQ9Y624 299 aaKnown RBP13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 TSTD3H0UI37 97 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 CRISP2P16562 243 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 DDTP30046 118 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 KIAA1644Q3SXP7 199 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 PERPQ96FX8 193 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 C14orf144Q96I85 54 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 TRGV9Q99603 122 aa13.18□□□□□ -0.3
UBQLN1-201ENST00000257468 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
UBQLN1-201ENST00000257468 SERF1AO75920 110 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms