RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 OR1S2Q8NGQ3 325 aa17.07■□□□□ 0.32
LSM4-201ENST00000252816 C7orf50Q9BRJ6 194 aaKnown RBP17.07■□□□□ 0.32
LSM4-201ENST00000252816 KMT2CQ8NEZ4 4911 aaKnown RBP17.06■□□□□ 0.32
LSM4-201ENST00000252816 IGKV3-7A0A075B6H7 116 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 CENPXA8MT69 81 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 PLA2G10O15496 165 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 SCGB2A1O75556 95 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 OR10J1P30954 320 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 ETFRF1Q6IPR1 90 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 TCF24Q7RTU0 167 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 NPIPB3Q92617 1050 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 FAM110AQ9BQ89 295 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 GGTLC1Q9BX51 225 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 EDA2RQ9HAV5 297 aa17.06■□□□□ 0.32
LSM4-201ENST00000252816 IAPPP10997 89 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 ANXA7P20073 488 aaKnown RBP17.05■□□□□ 0.32
LSM4-201ENST00000252816 TFPI2P48307 235 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 DHRS2Q13268 280 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 GBGT1Q8N5D6 347 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 MUC7Q8TAX7 377 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 ACY3Q96HD9 319 aa17.05■□□□□ 0.32
LSM4-201ENST00000252816 LOC102724200A0A096LPH7 203 aaPredicted RBP17.04■□□□□ 0.32
LSM4-201ENST00000252816 FAM90A26D6RGX4 464 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 ADAP1O75689 374 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 DFFBO76075 338 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 IFNA4P05014 189 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 OR4E1P0C645 316 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 NPPCP23582 126 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 CRYBB3P26998 211 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 BMI1P35226 326 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 YPEL3P61236 119 aaPredicted RBP17.04■□□□□ 0.32
LSM4-201ENST00000252816 METTL26Q96S19 204 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 MAGT1Q9H0U3 335 aa17.04■□□□□ 0.32
LSM4-201ENST00000252816 C3orf84H3BNL1 204 aa17.03■□□□□ 0.32
LSM4-201ENST00000252816 ATP5IP56385 69 aaPredicted RBP17.03■□□□□ 0.32
LSM4-201ENST00000252816 LYG2Q86SG7 212 aa17.03■□□□□ 0.32
LSM4-201ENST00000252816 MPTX1A8MV57 137 aa17.02■□□□□ 0.32
LSM4-201ENST00000252816 LYRM1O43325 122 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 MED6O75586 246 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 CD5P06127 495 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 GPX4P36969 197 aaPredicted RBP17.01■□□□□ 0.31
LSM4-201ENST00000252816 ZNF124Q15973 351 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 APRG1Q8IVJ8 170 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 Q8WTZ3 238 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 MS4A6AQ9H2W1 248 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 TMEM231Q9H6L2 316 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 U3KQE9 123 aa17.01■□□□□ 0.31
LSM4-201ENST00000252816 A0A1W2PS18 150 aa17■□□□□ 0.31
LSM4-201ENST00000252816 A6NHS1 94 aa17■□□□□ 0.31
LSM4-201ENST00000252816 SYNGR2O43760 224 aa17■□□□□ 0.31
LSM4-201ENST00000252816 GAMTQ14353 236 aa17■□□□□ 0.31
LSM4-201ENST00000252816 CNPY1Q3B7I2 92 aa17■□□□□ 0.31
LSM4-201ENST00000252816 C4orf46Q504U0 113 aa17■□□□□ 0.31
LSM4-201ENST00000252816 WFDC3Q8IUB2 231 aa17■□□□□ 0.31
LSM4-201ENST00000252816 COQ8AQ8NI60 647 aa17■□□□□ 0.31
LSM4-201ENST00000252816 WRBO00258 174 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 TOMM40O96008 361 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 P2RY1P47900 373 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 RPL11P62913 178 aaKnown RBP16.99■□□□□ 0.31
LSM4-201ENST00000252816 PAFAH1B2P68402 229 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 USF2Q15853 346 aaPredicted RBP16.99■□□□□ 0.31
LSM4-201ENST00000252816 C20orf85Q9H1P6 137 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 MAP6D1Q9H9H5 199 aa16.99■□□□□ 0.31
LSM4-201ENST00000252816 IGKV1D-37A0A075B6S9 117 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 IL4P05112 153 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 RD3LP0DJH9 198 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 PSG1P11464 419 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 RAB11AP62491 216 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 CASC10Q5T4H9 136 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 LINC00299Q6ZSB3 139 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 FAM24BQ8N5W8 94 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 CIB3Q96Q77 187 aaPredicted RBP16.98■□□□□ 0.31
LSM4-201ENST00000252816 CCDC32Q9BV29 185 aa16.98■□□□□ 0.31
LSM4-201ENST00000252816 PAIP2BQ9ULR5 123 aaKnown RBP16.98■□□□□ 0.31
LSM4-201ENST00000252816 DNASE2O00115 360 aaPredicted RBP16.97■□□□□ 0.31
LSM4-201ENST00000252816 HNRNPCP07910 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LSM4-201ENST00000252816 RPL35AP18077 110 aaKnown RBP16.97■□□□□ 0.31
LSM4-201ENST00000252816 ID3Q02535 119 aa16.97■□□□□ 0.31
LSM4-201ENST00000252816 SLC35E1Q96K37 410 aa16.97■□□□□ 0.31
LSM4-201ENST00000252816 OVOL2Q9BRP0 275 aa16.97■□□□□ 0.31
LSM4-201ENST00000252816 TRAV2A0A0B4J234 112 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 IFNA21P01568 189 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 LYL1P12980 280 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 CMC4P56277 68 aaPredicted RBP16.96■□□□□ 0.31
LSM4-201ENST00000252816 ZNF90Q03938 601 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 OR4D5Q8NGN0 318 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 MITD1Q8WV92 249 aa16.96■□□□□ 0.31
LSM4-201ENST00000252816 NARS2Q96I59 477 aaKnown RBP16.96■□□□□ 0.31
LSM4-201ENST00000252816 ZFP92A6NM28 416 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 PRSS46E5RG02 174 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 H3BP45 60 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 TCRBP04435 133 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 APOC4P55056 127 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 POLR2GP62487 172 aaKnown RBP eCLIP16.95■□□□□ 0.3
LSM4-201ENST00000252816 SPANXN5Q5MJ07 72 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 C16orf54Q6UWD8 224 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 OR51G1Q8NGK1 321 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 GLMPQ8WWB7 406 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 RABAC1Q9UI14 185 aa16.95■□□□□ 0.3
LSM4-201ENST00000252816 CSMD3Q7Z407 3707 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms