RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 ZNF680Q8NEM1 530 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 LRRC20Q8TCA0 184 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 MYOZ3Q8TDC0 251 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 NPIPB3Q92617 1050 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 EEF1AKMT3Q96AZ1 226 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 NPCDR1Q9BY65 106 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 ZNF355PQ9NSJ1 428 aa10.08□□□□□ -0.8
LSM8-201ENST00000249299 RGS13O14921 159 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 PRH1P02810 166 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 TRGV3P03979 118 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 CAMLGP49069 296 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 RND2P52198 227 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 YPEL3P61236 119 aaPredicted RBP10.07□□□□□ -0.8
LSM8-201ENST00000249299 MLANAQ16655 118 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 PXDC1Q5TGL8 231 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 C19orf35Q6ZS72 473 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 HSD17B11Q8NBQ5 300 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 ZNF502Q8TBZ5 544 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 WIPF2Q8TF74 440 aaPredicted RBP10.07□□□□□ -0.8
LSM8-201ENST00000249299 ACY3Q96HD9 319 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 C19orf24Q9BVV8 132 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 ZFP92A6NM28 416 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 AGPAT2O15120 278 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 IGLC1P0CG04 106 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 PF4V1P10720 104 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 OR10J1P30954 320 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 TPPP2P59282 170 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 DPPA3Q6W0C5 159 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 MGST2Q99735 147 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 GGTLC1Q9BX51 225 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 SLC45A2Q9UMX9 530 aa10.07□□□□□ -0.8
LSM8-201ENST00000249299 IGKV1OR2-108A0A075B7D4 117 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 GNG7O60262 68 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 TSPAN15O95858 294 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 SULT1A2P50226 295 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 KLHDC1Q8N7A1 406 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 UBQLN2Q9UHD9 624 aa10.06□□□□□ -0.8
LSM8-201ENST00000249299 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
LSM8-201ENST00000249299 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
LSM8-201ENST00000249299 NUPL2O15504 423 aaKnown RBP10.05□□□□□ -0.8
LSM8-201ENST00000249299 IGKV1-17P01599 117 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 PLP1P60201 277 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 IFITM2Q01629 132 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 Q6ZRG5 221 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 ZNF329Q86UD4 541 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 BPIFCQ8NFQ6 507 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 TMED6Q8WW62 240 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
LSM8-201ENST00000249299 MS4A10Q96PG2 267 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 KLK15Q9H2R5 256 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
LSM8-201ENST00000249299 MRPL36Q9P0J6 103 aaKnown RBP10.05□□□□□ -0.8
LSM8-201ENST00000249299 ELOA3CA0A087WX78 387 aaPredicted RBP10.04□□□□□ -0.8
LSM8-201ENST00000249299 TOMM40O96008 361 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 CLEC3BP05452 202 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 CTSGP08311 255 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 M6PRP20645 277 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 S100A7P31151 101 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 CDX1P47902 265 aaPredicted RBP10.04□□□□□ -0.8
LSM8-201ENST00000249299 RUNX1Q01196 453 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 KIAA0141Q14154 515 aaPredicted RBP10.04□□□□□ -0.8
LSM8-201ENST00000249299 ACOT6Q3I5F7 207 aaPredicted RBP10.04□□□□□ -0.8
LSM8-201ENST00000249299 Q56UQ5 140 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 AKR1C8PQ5T2L2 129 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 ZNF491Q8N8L2 437 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 OR5AU1Q8NGC0 362 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 RNF2Q99496 336 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 MDFIQ99750 246 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 RNF24Q9Y225 148 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
LSM8-201ENST00000249299 TGOLN2O43493 480 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 OR2C1O95371 312 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 LINC00869P0C866 280 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 PROK1P58294 105 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 B2MP61769 119 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 RELQ04864 619 aaPredicted RBP10.03□□□□□ -0.8
LSM8-201ENST00000249299 ZNF616Q08AN1 781 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 FOXL1Q12952 345 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 ALKAL2Q6UX46 152 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms