RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 A0A0G2JMM0 328 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 A0A1W2PPB8 328 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 KIR3DP1A8MWS1 328 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 CEACAM1P13688 526 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 RCHY1Q96PM5 261 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 AMELYQ99218 206 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 NIT1Q86X76 327 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
NEK9-201ENST00000238616 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 NBR2O15453 112 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
NEK9-201ENST00000238616 TMEM8BA6NDV4 472 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 SRSF1Q07955 248 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEK9-201ENST00000238616 MESP2Q0VG99 397 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 MEGF9Q9H1U4 602 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 SIRT4Q9Y6E7 314 aaPredicted RBP11.09□□□□□ -0.63
NEK9-201ENST00000238616 RAMP3O60896 148 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 PAX8Q06710 450 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 ZNF474Q6S9Z5 364 aaPredicted RBP11.09□□□□□ -0.63
NEK9-201ENST00000238616 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 COL24A1Q17RW2 1714 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 CCL3L1P16619 93 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
NEK9-201ENST00000238616 BHLHA9Q7RTU4 235 aa11.09□□□□□ -0.63
NEK9-201ENST00000238616 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 TFF1P04155 84 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.08□□□□□ -0.64
NEK9-201ENST00000238616 SAXO1Q8IYX7 474 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
NEK9-201ENST00000238616 RNASE6Q93091 150 aaKnown RBP11.08□□□□□ -0.64
NEK9-201ENST00000238616 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 IGHV1-2P23083 117 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 CFHR3Q02985 330 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 NPIPB13A6NJU9 1138 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 NPIPB5A8MRT5 1133 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 NDPQ00604 133 aa11.08□□□□□ -0.64
NEK9-201ENST00000238616 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 Q96M66 194 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 SONP18583 2426 aaKnown RBP11.07□□□□□ -0.64
NEK9-201ENST00000238616 KBTBD11-OT1A0A1B0GTJ5 212 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 NDUFS5O43920 106 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 IFI27L2Q9H2X8 130 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 ANAPC10Q9UM13 185 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 C17orf98A8MV24 154 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
NEK9-201ENST00000238616 WNT2P09544 360 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 EREGO14944 169 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 PLA2G10O15496 165 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 GDF15Q99988 308 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
NEK9-201ENST00000238616 PCP4P48539 62 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 DPM2O94777 84 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
NEK9-201ENST00000238616 DEFB130BP0DP73 79 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 DEFB130AP0DP74 79 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
NEK9-201ENST00000238616 C8orf82Q6P1X6 216 aaPredicted RBP11.06□□□□□ -0.64
NEK9-201ENST00000238616 C17orf100A8MU93 164 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 CCL1P22362 96 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 ERCC8Q13216 396 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 GATA4P43694 442 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
NEK9-201ENST00000238616 H3BUT2 72 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
NEK9-201ENST00000238616 CD55P08174 381 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 VMO1Q7Z5L0 202 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 ASCL2Q99929 193 aa11.06□□□□□ -0.64
NEK9-201ENST00000238616 THBDP07204 575 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 DANCRP0C864 163 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
NEK9-201ENST00000238616 TMEM187Q14656 261 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
NEK9-201ENST00000238616 NUP210LQ5VU65 1888 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 NOTCH4Q99466 2003 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
NEK9-201ENST00000238616 FSTP19883 344 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 ATP5G3P48201 142 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 C2orf68Q2NKX9 166 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 DTX1Q86Y01 620 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 THAP8Q8NA92 274 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 TECTAO75443 2155 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
NEK9-201ENST00000238616 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
NEK9-201ENST00000238616 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms