RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 SNHG12Q9BXW3 62 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGLV3-32A0A0A0MS00 114 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGHV4-39P01824 125 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 SLC25A39Q9BZJ4 359 aaPredicted RBP6.88□□□□□ -1.31
APOB-201ENST00000233242 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 TMEM256Q8N2U0 113 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 CRISPLD2Q9H0B8 497 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 NYNRINQ9P2P1 1898 aaKnown RBP6.88□□□□□ -1.31
APOB-201ENST00000233242 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 MST1P26927 711 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 PARP14Q460N5 1801 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 SLC25A20O43772 301 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 GLRXP35754 106 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 MESP1Q9BRJ9 268 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 TRAV8-1A0A0A6YYK1 113 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 IQCF6A8MYZ5 107 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 ZIC3O60481 467 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 LGALS1P09382 135 aaKnown RBP6.87□□□□□ -1.31
APOB-201ENST00000233242 Q6ZS49 121 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 SLC22A18ASQ8N1D0 253 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 SLX1AQ9BQ83 275 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 NKX2-8O15522 239 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 COX6A1P12074 109 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 PMS2CLQ68D20 193 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
APOB-201ENST00000233242 OR13A1Q8NGR1 328 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 GREB1LQ9C091 1923 aaPredicted RBP6.87□□□□□ -1.31
APOB-201ENST00000233242 TET1Q8NFU7 2136 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 TIMP4Q99727 224 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 PF4V1P10720 104 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 SPAG8Q99932 426 aaPredicted RBP6.87□□□□□ -1.31
APOB-201ENST00000233242 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 GGTLC1Q9BX51 225 aa6.87□□□□□ -1.31
APOB-201ENST00000233242 FOXA2Q9Y261 457 aaPredicted RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 POLR3KQ9Y2Y1 108 aaPredicted RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 MRPS18CQ9Y3D5 142 aaKnown RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 CHCHD2Q9Y6H1 151 aaPredicted RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 ADAMTSL5Q6ZMM2 481 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 TRBV20-1A0A075B6N2 111 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 FNDC10F2Z333 226 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 F8W1H4 67 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 DPM3Q9P2X0 92 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 TRBV6-6A0A0A6YYG2 114 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 FAM231BA6NCW3 169 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 PRR32B1ATL7 298 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 LHX2P50458 406 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 C1orf210Q8IVY1 113 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 C8orf46Q8TAG6 207 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 PCNX2A6NKB5 2137 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 MUC21Q5SSG8 566 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 RNF125Q96EQ8 232 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 PCOLCEQ15113 449 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 LOC105371242A0A075B767 164 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 A0A1B0GWJ7 208 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 SAA1P0DJI8 122 aaPredicted RBP6.86□□□□□ -1.31
APOB-201ENST00000233242 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 LCTP09848 1927 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 A0A087X0K7 114 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 B9A039 149 aa6.86□□□□□ -1.31
APOB-201ENST00000233242 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 PPDPFLQ8WWR9 84 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 PLXNA1Q9UIW2 1896 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 TDGF1P13385 188 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 GNG5P63218 68 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 PSMB11A5LHX3 300 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 DUTP33316 252 aaKnown RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 PSG3Q16557 428 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 RAMP3O60896 148 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 FAM57AQ8TBR7 257 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 TRGV9Q99603 122 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 PSME4Q14997 1843 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 KLF12Q9Y4X4 402 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 SAA2-SAA4A0A096LPE2 208 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 A0A0A6YYD4 124 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 SAA2P0DJI9 122 aaPredicted RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 LEAP2Q969E1 77 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
APOB-201ENST00000233242 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
APOB-201ENST00000233242 TMEM8BA6NDV4 472 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 ZNRF1Q8ND25 227 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 WBP1Q96G27 269 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 CD55P08174 381 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
APOB-201ENST00000233242 LCN12Q6JVE5 192 aa6.84□□□□□ -1.31
APOB-201ENST00000233242 VSIRQ9H7M9 311 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms