RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 HOXA3O43365 443 aaPredicted RBP6.5□□□□□ -1.37
NANOG-201ENST00000229307 HSPB1P04792 205 aaKnown RBP6.5□□□□□ -1.37
NANOG-201ENST00000229307 CFPP27918 469 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 IBA57Q5T440 356 aaKnown RBP6.5□□□□□ -1.37
NANOG-201ENST00000229307 ZNF833PQ6ZTB9 187 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 TMEM131Q92545 1883 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 HERVK_113P61574 105 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 NR2C2APQ86WQ0 139 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 STPG2Q8N412 459 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 FMC1Q96HJ9 113 aa6.5□□□□□ -1.37
NANOG-201ENST00000229307 RANBP2P49792 3224 aaKnown RBP6.5□□□□□ -1.37
NANOG-201ENST00000229307 OR11H12B2RN74 326 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
NANOG-201ENST00000229307 TCL1AP56279 114 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 TMEM158Q8WZ71 300 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 HEATR1Q9H583 2144 aaKnown RBP6.49□□□□□ -1.37
NANOG-201ENST00000229307 H3BUA1 57 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 NDUFB4O95168 129 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 WDR86Q86TI4 376 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 TRGV11A0A075B6L2 103 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 IGKV1D-8A0A087WSZ0 117 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 EIF3GO75821 320 aaKnown RBP eCLIP6.49□□□□□ -1.37
NANOG-201ENST00000229307 MFAP2P55001 183 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 ZNF329Q86UD4 541 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 JKAMPQ9P055 326 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 EML5Q05BV3 1969 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 TRGV2A0A075B6R0 118 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 PPP1R17O96001 155 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 GCGP01275 180 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
NANOG-201ENST00000229307 LHFPL4Q7Z7J7 247 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 TRGV9Q99603 122 aa6.49□□□□□ -1.37
NANOG-201ENST00000229307 ZNF106Q9H2Y7 1883 aaKnown RBP6.49□□□□□ -1.37
NANOG-201ENST00000229307 NDUFS7O75251 213 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
NANOG-201ENST00000229307 ZNF56Q15929 161 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 MYOZ3Q8TDC0 251 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 ASCL2Q99929 193 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 DAZ1Q9NQZ3 744 aaKnown RBP6.48□□□□□ -1.37
NANOG-201ENST00000229307 ALPK2Q86TB3 2170 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 RTTNQ86VV8 2226 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 ZNF407Q9C0G0 2248 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 H3BTX0 84 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 CRYBB3P26998 211 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 H2BFSP57053 126 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 ID3Q02535 119 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 FAM120AOSQ5T036 256 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 IL17RELQ6ZVW7 336 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 SRD5A3Q9H8P0 318 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 TSSC4Q9Y5U2 329 aaPredicted RBP6.48□□□□□ -1.37
NANOG-201ENST00000229307 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 CRISP2P16562 243 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 TFF3Q07654 80 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 C17orf58Q2M2W7 97 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 DEFB112Q30KQ8 113 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 C9orf139Q6ZV77 190 aa6.48□□□□□ -1.37
NANOG-201ENST00000229307 IGHV3OR16-8A0A075B7F1 116 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.47□□□□□ -1.37
NANOG-201ENST00000229307 IGLV3-1P01715 115 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 APCSP02743 223 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
NANOG-201ENST00000229307 PSMG4Q5JS54 123 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 OR10W1Q8NGF6 305 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 ATP6V0E1O15342 81 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 DANCRP0C864 163 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 CCKARP32238 428 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 KRTAP27-1Q3LI81 207 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 MRPL54Q6P161 138 aaKnown RBP6.47□□□□□ -1.37
NANOG-201ENST00000229307 CIARTQ8N365 385 aaPredicted RBP6.47□□□□□ -1.37
NANOG-201ENST00000229307 Q9H3A6 140 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 CENPFP49454 3210 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 H3BQ15 152 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 C10orf55Q5SWW7 151 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 TRAV21A0A0B4J279 112 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 AMBPP02760 352 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 MT-ND6P03923 174 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 AREGP15514 252 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 HTN3P15516 51 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 CXCL2P19875 107 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 RSPO1Q2MKA7 263 aaPredicted RBP6.47□□□□□ -1.37
NANOG-201ENST00000229307 LY6G6FQ5SQ64 297 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 TMPRSS5Q9H3S3 457 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 CHD9Q3L8U1 2897 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 MED12Q93074 2177 aa6.47□□□□□ -1.37
NANOG-201ENST00000229307 PEX7O00628 323 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 PRSS1P07477 247 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 OR5AL1P0C617 328 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 OR11H6Q8NGC7 330 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 NEU1Q99519 415 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 ABCA4P78363 2273 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 TMEM218A2RU14 115 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 C22orf46C9J442 243 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 PMCHP20382 165 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 EMP1P54849 157 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 PAPPA-AS1Q5QFB9 102 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 TMEM86BQ8N661 226 aa6.46□□□□□ -1.37
NANOG-201ENST00000229307 OR11H4Q8NGC9 324 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms