RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 TMEM178AQ8NBL3 297 aa12.49□□□□□ -0.41
VTN-201ENST00000226218 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
VTN-201ENST00000226218 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
VTN-201ENST00000226218 SOX21Q9Y651 276 aaPredicted RBP12.49□□□□□ -0.41
VTN-201ENST00000226218 TCRBV4S1A1TA0A5B7 111 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 E7EUB6 86 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 M0QZ24 198 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 VAMP3Q15836 100 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 RPP21Q9H633 154 aaKnown RBP12.48□□□□□ -0.41
VTN-201ENST00000226218 ZNF430Q9H8G1 570 aaPredicted RBP12.48□□□□□ -0.41
VTN-201ENST00000226218 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 EPDR1Q9UM22 224 aa12.48□□□□□ -0.41
VTN-201ENST00000226218 CGB1A6NKQ9 187 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 BPIFB3P59826 476 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 PRR31Q5SQ13 230 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 RPUSD1Q9UJJ7 312 aaKnown RBP12.47□□□□□ -0.41
VTN-201ENST00000226218 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
VTN-201ENST00000226218 GPR82Q96P67 336 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 GAFA1Q96PS6 74 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 ZNF492Q9P255 531 aa12.47□□□□□ -0.41
VTN-201ENST00000226218 LEPROTL1O95214 131 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 NUDT3O95989 172 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 CD24P25063 80 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 ERHP84090 104 aaKnown RBP12.46□□□□□ -0.41
VTN-201ENST00000226218 ATP1A1-AS1Q5TC04 95 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 UBALD2Q8IYN6 164 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 PLSCR4Q9NRQ2 329 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 MRPL36Q9P0J6 103 aaKnown RBP12.46□□□□□ -0.41
VTN-201ENST00000226218 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.41
VTN-201ENST00000226218 WASHC3Q9Y3C0 194 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 SLC25A15Q9Y619 301 aa12.46□□□□□ -0.41
VTN-201ENST00000226218 MOSP00540 346 aa12.46□□□□□ -0.42
VTN-201ENST00000226218 ZNF883P0CG24 379 aa12.46□□□□□ -0.42
VTN-201ENST00000226218 GATA4P43694 442 aa12.46□□□□□ -0.42
VTN-201ENST00000226218 FOXA3P55318 350 aaPredicted RBP12.46□□□□□ -0.42
VTN-201ENST00000226218 ERASQ7Z444 233 aa12.46□□□□□ -0.42
VTN-201ENST00000226218 CST9LQ9H4G1 147 aa12.46□□□□□ -0.42
VTN-201ENST00000226218 ZNF71Q9NQZ8 489 aaPredicted RBP12.46□□□□□ -0.42
VTN-201ENST00000226218 TMEM265A0A087WTH1 108 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 OR2T8A6NH00 312 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 WT1-ASQ06250 92 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 PET117Q6UWS5 81 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 NDFIP1Q9BT67 221 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 GFRA4Q9GZZ7 299 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 TMEM191AQ9H0A3 160 aa12.45□□□□□ -0.42
VTN-201ENST00000226218 INTS1Q8N201 2190 aaKnown RBP12.45□□□□□ -0.42
VTN-201ENST00000226218 A8MWL6 223 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 OVOL3O00110 214 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 TM4SF5O14894 197 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 LTAP01374 205 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 C12orf54Q6X4T0 127 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 NPIPB3Q92617 1050 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 LAMTOR5O43504 91 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
VTN-201ENST00000226218 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 PSG1P11464 419 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 BHLHA15Q7RTS1 189 aaPredicted RBP12.44□□□□□ -0.42
VTN-201ENST00000226218 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 RND1Q92730 232 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 SGK494Q96LW2 274 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 HARBI1Q96MB7 349 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 MRPL20Q9BYC9 149 aaKnown RBP12.44□□□□□ -0.42
VTN-201ENST00000226218 MS4A6AQ9H2W1 248 aa12.44□□□□□ -0.42
VTN-201ENST00000226218 LOC102724200A0A096LPH7 203 aaPredicted RBP12.43□□□□□ -0.42
VTN-201ENST00000226218 PRR33A8MZF0 331 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 NPIPB6E9PJ23 425 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 CD5LO43866 347 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
VTN-201ENST00000226218 LIPFP07098 398 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 RNF151Q2KHN1 245 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 OCIAD2Q56VL3 154 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 OR5AN1Q8NGI8 311 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 IGLV3-9A0A075B6K5 115 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 PGPA6NDG6 321 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 SPRY3O43610 288 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 PLAUP00749 431 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 SP9P0CG40 484 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 LDLRAD2Q5SZI1 272 aa12.43□□□□□ -0.42
VTN-201ENST00000226218 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
VTN-201ENST00000226218 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
VTN-201ENST00000226218 FMC1Q96HJ9 113 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms