RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ICAM4Q14773 271 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 CIARTQ8N365 385 aaPredicted RBP13.2□□□□□ -0.3
TVP23C-201ENST00000225576 RNF2Q99496 336 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 TMUB1Q9BVT8 246 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 SLC35B3Q9H1N7 401 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 CSMD1Q96PZ7 3565 aa13.2□□□□□ -0.3
TVP23C-201ENST00000225576 PRRC2AP48634 2157 aaKnown RBP13.19□□□□□ -0.3
TVP23C-201ENST00000225576 MDFIC2A0A1B0GVS7 189 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 PSMB11A5LHX3 300 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
TVP23C-201ENST00000225576 LINC01548A6NM66 108 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 CLN5O75503 358 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 CXorf1O96002 111 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 APOC3P02656 99 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 OR5G3P0C626 314 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 PPT1P50897 306 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 ZNF48Q96MX3 618 aaPredicted RBP13.19□□□□□ -0.3
TVP23C-201ENST00000225576 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
TVP23C-201ENST00000225576 IER3P46695 156 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 TEX29Q8N6K0 151 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 OR5R1Q8NH85 324 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 RXFP4Q8TDU9 374 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 PFDN5Q99471 154 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
TVP23C-201ENST00000225576 TMPRSS5Q9H3S3 457 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 VAX2Q9UIW0 290 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 TACC2O95359 2948 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
TVP23C-201ENST00000225576 SRP19P09132 144 aaKnown RBP13.18□□□□□ -0.3
TVP23C-201ENST00000225576 NPBWR1P48145 328 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 MFAP4P55083 255 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
TVP23C-201ENST00000225576 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
TVP23C-201ENST00000225576 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 NDUFB8O95169 186 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 IGHG2P01859 326 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 IGF1P05019 195 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 FABP1P07148 127 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 ARL14EPLP0DKL9 152 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 PLP1P60201 277 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 SPATA31B1PQ5VZV4 182 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 SPNS3Q6ZMD2 512 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 PRDM13Q9H4Q3 707 aa13.17□□□□□ -0.3
TVP23C-201ENST00000225576 TECRQ9NZ01 308 aaKnown RBP13.17□□□□□ -0.3
TVP23C-201ENST00000225576 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 G3V318 75 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 OR2J3O76001 311 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 IGKV1-17P01599 117 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
TVP23C-201ENST00000225576 TAS2R45P59539 299 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 Q6YL49 198 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 MIR17HGQ75NE6 70 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 IQCF2Q8IXL9 164 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 SVBPQ8N300 66 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 TXN2Q99757 166 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
TVP23C-201ENST00000225576 C21orf62Q9NYP8 219 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 FBXL7Q9UJT9 491 aa13.16□□□□□ -0.3
TVP23C-201ENST00000225576 SMAD7O15105 426 aaKnown RBP13.15□□□□□ -0.3
TVP23C-201ENST00000225576 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 GCHFRP30047 84 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 DEFA5Q01523 94 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 TIGITQ495A1 244 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 C9orf152Q5JTZ5 239 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 PATE2Q6UY27 113 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
TVP23C-201ENST00000225576 GNG7O60262 68 aa13.14□□□□□ -0.31
TVP23C-201ENST00000225576 PSG1P11464 419 aa13.14□□□□□ -0.31
TVP23C-201ENST00000225576 YPEL3P61236 119 aaPredicted RBP13.14□□□□□ -0.31
TVP23C-201ENST00000225576 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
TVP23C-201ENST00000225576 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
TVP23C-201ENST00000225576 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
TVP23C-201ENST00000225576 PAGE4O60829 102 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 BRI3O95415 125 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 TOMM40O96008 361 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 BLCAPP62952 87 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 NECAP1Q8NC96 275 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 DOK5Q9P104 306 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 APCP25054 2843 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 ABCA1O95477 2261 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 HYPMO75409 117 aa13.13□□□□□ -0.31
TVP23C-201ENST00000225576 SCGB2A1O75556 95 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms