RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.71
DDX17-201ENST00000216019 GAFA1Q96PS6 74 aa10.65□□□□□ -0.71
DDX17-201ENST00000216019 CYTL1Q9NRR1 136 aa10.65□□□□□ -0.71
DDX17-201ENST00000216019 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 CA1P00915 261 aaPredicted RBP10.64□□□□□ -0.71
DDX17-201ENST00000216019 EVI2AP22794 236 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 PAX8Q06710 450 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 BMPERQ8N8U9 685 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 TRAV41A0A0B4J266 112 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 SBF1O95248 1867 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 GFI1BQ5VTD9 330 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 TOMM7Q9P0U1 55 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 PLXNA3P51805 1871 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 H3BRM9 83 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 TPTE2P1Q5T6R2 138 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
DDX17-201ENST00000216019 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
DDX17-201ENST00000216019 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
DDX17-201ENST00000216019 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
DDX17-201ENST00000216019 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 MGST2Q99735 147 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 PEF1Q9UBV8 284 aaKnown RBP10.63□□□□□ -0.71
DDX17-201ENST00000216019 RFNGQ9Y644 331 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 CD33P20138 364 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 SAMD13Q5VXD3 122 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 IGKV1-5P01602 117 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 MBD3L1Q8WWY6 194 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 Q6P435 159 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 QRFPP83859 136 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 GGTLC1Q9BX51 225 aa10.63□□□□□ -0.71
DDX17-201ENST00000216019 EFNA4P52798 201 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 HEPN1Q6WQI6 88 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 GZMBP10144 247 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 DNAL4O96015 105 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 JKAMPQ9P055 326 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 LINC00205P59089 165 aa10.62□□□□□ -0.71
DDX17-201ENST00000216019 SLC25A48Q6ZT89 311 aaKnown RBP10.62□□□□□ -0.71
DDX17-201ENST00000216019 H0YJW9 148 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 SPTBP11277 2137 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 LINC00473A8K010 186 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 TDGF1P13385 188 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 CACNG7P62955 275 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 TMEM42Q69YG0 159 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 DUSP14O95147 198 aaKnown RBP10.61□□□□□ -0.71
DDX17-201ENST00000216019 FAM166AQ6J272 317 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 IGKV1D-17A0A075B6S4 117 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 NUDT10Q8NFP7 164 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 NEUROG1Q92886 237 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
DDX17-201ENST00000216019 PSG1P11464 419 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 NMSQ5H8A3 153 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 COQ2Q96H96 371 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 PMS2P5A8MQ11 134 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 SRSF1Q07955 248 aaKnown RBP eCLIP10.6□□□□□ -0.716e-8■■■■■ 31
DDX17-201ENST00000216019 BRD3OSQ6XYD6 125 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 SLC25A39Q9BZJ4 359 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 MBD3L4A6NDZ8 208 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 MBD3L3A6NE82 208 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 MBD3L5A6NJ08 208 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 LYPD2Q6UXB3 125 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 MBD3L2Q8NHZ7 208 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 SEPSECSQ9HD40 501 aaKnown RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 APOMO95445 188 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 GNB1LQ9BYB4 327 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 VWA8A3KMH1 1905 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 CD5P06127 495 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 LINC00614P0C842 121 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 C3orf36Q3SXR2 165 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
DDX17-201ENST00000216019 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
DDX17-201ENST00000216019 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
DDX17-201ENST00000216019 COL8A2P25067 703 aa10.59□□□□□ -0.71
DDX17-201ENST00000216019 CXCL1P09341 107 aa10.59□□□□□ -0.71
DDX17-201ENST00000216019 FHL1Q13642 323 aa10.59□□□□□ -0.71
DDX17-201ENST00000216019 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms