RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 C2orf88Q9BSF0 95 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 MLANAQ16655 118 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 CACNA1GO43497 2377 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 IFNL4K9M1U5 179 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 NBR2O15453 112 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 BRD3OSQ6XYD6 125 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 Q8TAT8 98 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNF257Q9Y2Q1 563 aa11.28□□□□□ -0.6
TGFBR3-201ENST00000212355 hDV102S1A0JD36 115 aa11.27□□□□□ -0.6
TGFBR3-201ENST00000212355 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.6
TGFBR3-201ENST00000212355 FAM186AA6NE01 2351 aa11.27□□□□□ -0.6
TGFBR3-201ENST00000212355 SMAGPQ0VAQ4 97 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 STHQ8IWL8 128 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 PMS2P5A8MQ11 134 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 RNF125Q96EQ8 232 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 LINC00312Q9Y6C7 94 aa11.27□□□□□ -0.61
TGFBR3-201ENST00000212355 MALP21145 153 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 LCN12Q6JVE5 192 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 CEACAM1P13688 526 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 POLEQ07864 2286 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 TM4SF5O14894 197 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 TCRAP04437 139 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 PTPRDP23468 1912 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 CA7P43166 264 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM170AQ8WVE7 144 aa11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
TGFBR3-201ENST00000212355 PSPNO60542 156 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 PSMG4Q5JS54 123 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 ZIC4Q8N9L1 334 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 GAS1P54826 345 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 Q0VFX4 171 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 NEUROG1Q92886 237 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM42Q69YG0 159 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM256Q8N2U0 113 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
TGFBR3-201ENST00000212355 KIAA2026Q5HYC2 2103 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 CNTFRP26992 372 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 MGST2Q99735 147 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 PAX2Q02962 417 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 GLRX5Q86SX6 157 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 FAM89BQ8N5H3 189 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 TRAV8-1A0A0A6YYK1 113 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM200BQ69YZ2 307 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 A0A1B0GUS0 222 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 LINC00477Q96M19 166 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
TGFBR3-201ENST00000212355 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 VCX2Q9H322 139 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 CD28P10747 220 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM249Q2WGJ8 235 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 A0A087WWC5 75 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 A0A087X0K7 114 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 D6R8Y8 96 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 E9PLN8 166 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM144Q7Z5S9 345 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 GGNQ86UU5 652 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 TRAV21A0A0B4J279 112 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms