RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 VMO1Q7Z5L0 202 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 GDF15Q99988 308 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PARD6GQ9BYG4 376 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 SPCS1Q9Y6A9 102 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 LRP5O75197 1615 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 IGKV1D-12P01611 117 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 SPANXDQ9BXN6 97 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 UBE2D4Q9Y2X8 147 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MSGN1A6NI15 193 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 NDUFA4O00483 81 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 RND3P61587 244 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 COQ2Q96H96 371 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 TMEM133Q9H2Q1 129 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PMVKQ15126 192 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 FGFRL1Q8N441 504 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 SCRT2Q9NQ03 307 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 TCF19Q9Y242 345 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MBD3L4A6NDZ8 208 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 MBD3L3A6NE82 208 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 MBD3L5A6NJ08 208 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 F8W735 103 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 H3BQ85 93 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 CRYBB3P26998 211 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 C8orf31Q8N9H6 132 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MBD3L2Q8NHZ7 208 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 CD300EQ496F6 205 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 KLF17Q5JT82 389 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 CBLN2Q8IUK8 224 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 LAGE3Q14657 143 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRSS29PA6NIE9 313 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 WFDC6Q9BQY6 131 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 ATG2BQ96BY7 2078 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 TP53BP1Q12888 1972 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 A6NNC1 897 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MSMBP08118 114 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 ZNF625Q96I27 306 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 AZU1P20160 251 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 C8orf82Q6P1X6 216 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 FAM60AQ9NP50 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 AURKAIP1Q9NWT8 199 aaPredicted RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 ANKRD39Q53RE8 183 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 CRYGNQ8WXF5 182 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MARVELD1Q9BSK0 173 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 Q9H3A6 140 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MRPL36Q9P0J6 103 aaKnown RBP2.88□□□□□ -1.95
NEB-201ENST00000172853 NEU3Q9UQ49 428 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PEX11BO96011 259 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 C5orf64Q2M2E5 130 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 ATRAIDQ6UW56 229 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 LINC00299Q6ZSB3 139 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 KIR2DL5BA0A0G2JN68 375 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 KIR2DL5BA0A0G2JPC4 375 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 GRIFINA4D1Z8 144 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MARCH11A6NNE9 402 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 ATP6V0CP27449 155 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 FXYD7P58549 80 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRR20EP86478 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRR20CP86479 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRR20DP86480 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRR20BP86481 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRR20AP86496 221 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 CR1LQ2VPA4 569 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PRIMA1Q86XR5 153 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 KIR2DL5AQ8N109 375 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 GGACTQ9BVM4 153 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 MYO7AQ13402 2215 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 SNED1Q8TER0 1413 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 H3BTX0 84 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 IGF2P01344 180 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 ATP1A1-AS1Q5TC04 95 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 C1QL2Q7Z5L3 287 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 M0R1W7 72 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 FUSP35637 526 aaKnown RBP eCLIP2.88□□□□□ -1.95
NEB-201ENST00000172853 C9orf153Q5TBE3 101 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 CDCP2Q5VXM1 449 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 PAQR9Q6ZVX9 377 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 C7orf33Q8WU49 177 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 SPART-AS1P0CW21 52 aa2.88□□□□□ -1.95
NEB-201ENST00000172853 TRBV5-3A0A0A0MS03 114 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 SSBP2P81877 361 aaPredicted RBP2.87□□□□□ -1.95
NEB-201ENST00000172853 INSL4Q14641 139 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 MIC13Q5XKP0 118 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 EFNA2O43921 213 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 LY6G5BQ8NDX9 201 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 LEAP2Q969E1 77 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 IGF2BP2-AS1Q96M15 143 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 HMSDA8MTL9 139 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 SLC17A3O00476 420 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 GCM2O75603 506 aaPredicted RBP2.87□□□□□ -1.95
NEB-201ENST00000172853 WDYHV1Q96HA8 205 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 Q9HAA7 133 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 SPANXA1Q9NS26 97 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 SCN9AQ15858 1988 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 PQLC2LA1A4F0 135 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 C16orf54Q6UWD8 224 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 DEFB131AP59861 70 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
NEB-201ENST00000172853 ANGP03950 147 aaKnown RBP2.87□□□□□ -1.95
NEB-201ENST00000172853 LYZL2Q7Z4W2 148 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms