RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr573-ps1A0A1B0GRU2 297 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15217A2CG07 155 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr427E9Q7E7 315 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Iqcf6G3UWF2 157 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm21746J3QMM6 180 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Hbb-bh0P04443 147 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 NfyaP23708 346 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rab18P35293 206 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gpr12P35412 334 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 GferP56213 198 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 ClcP97400 68 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 PcnpQ6P8I4 178 aaKnown RBP7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gpr119Q7TQP3 335 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Fam25cQ8CF02 89 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 StradbQ8K4T3 418 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Acaa1bQ8VCH0 424 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Pbp2Q8VIN1 187 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ndufa2Q9CQ75 99 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mrpl41Q9CQN7 135 aaKnown RBP7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Immp1lQ9CQU8 166 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Trav18A0A075B656 109 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tcrg-C4A0A075B6C7 190 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Trbv26A0A0B4J1P5 115 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15114B1B0X6 433 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Vmn1r180B9EK86 305 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Prr23a2D3YWX5 253 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr918E9PVZ7 325 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm9925F6T2U3 160 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Nxph4G3X9N5 304 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr906K7N5P3 311 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 H2-M10.1O19443 331 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 ColqO35348 457 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tnfsf12O54907 249 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mcpt8P43430 247 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 CebpdQ00322 268 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Slc39a7Q31125 476 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Scarb1Q61009 509 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 MffQ6PCP5 291 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1137Q7TR40 310 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Lmf2Q8C3X8 702 aaKnown RBP7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr266Q8VFC3 316 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr736Q8VFT6 312 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rab14Q91V41 215 aaKnown RBP7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 HpxQ91X72 460 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mrpl28Q9D1B9 257 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ighv14-3A0A075B5R9 117 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tmem116A0A0G2JGD3 401 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Arl16B1ATY8 173 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tex45G3XA23 500 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm5615Q3UW02 101 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Prss44Q402U7 372 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mmp28Q8CGV8 520 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr492Q8VFD1 314 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Dmbx1Q91ZK4 381 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Lysmd2Q9D7V2 215 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Cir1Q9DA19 450 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Golt1aQ9DCQ3 133 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr716Q9EPG6 314 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 Clec6aQ9JKF4 209 aa7.19□□□□□ -1.26
Trim39-201ENSMUST00000042717 OdamA1E960 273 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 H2-Q10P01898 325 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 PtgirP43252 415 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Lhx4P53776 390 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rpl30P62889 115 aaKnown RBP7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gal3st2Q6XQH0 394 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 LmlnQ8BMN4 681 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ankrd46Q8BTZ5 228 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Txnl1Q8CDN6 289 aaKnown RBP7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Plekhf2Q91WB4 249 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 FrkQ922K9 512 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Plrg1Q922V4 513 aaKnown RBP7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 SvbpQ99LQ4 66 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rpp14Q9CQH8 122 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Bahcc1Q3UHR0 2643 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr267A2AM35 313 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tnfaip6O08859 275 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 P01806 116 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ear1P97426 155 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 PurgQ8R4E6 350 aaKnown RBP7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr167Q8VGJ5 312 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Siglec12Q91Y57 467 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Herpud1Q9JJK5 391 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tep1P97499 2629 aa7.18□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm9970F6ZED4 185 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr905L7N1X5 310 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 HbzP06467 142 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Trim63Q38HM4 350 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Fndc4Q3TR08 231 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Zg16Q8K0C5 167 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rhbdd2Q8VEK2 361 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr530Q8VFE8 307 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr76Q8VFV2 317 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 ShpkQ9D5J6 476 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr710Q9EP55 310 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr957Q9EQB7 311 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Cml5Q9QXS8 227 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Armcx4E9PWM3 2356 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ighv9-3A0A0B4J1J5 117 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ankrd66J3QNN4 192 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Onecut1O08755 465 aa7.17□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms