RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 YIF1AO95070 293 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 OPRK1P41145 380 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 CCR6P51684 374 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 SMCO1Q147U7 214 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 BAK1Q16611 211 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 OR52B4Q8NGK2 314 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
PHGDH-231ENST00000641939 NXPH3O95157 252 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 VAMP1P23763 118 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 RBMS2Q15434 407 aaKnown RBP11.27□□□□□ -0.61
PHGDH-231ENST00000641939 HAGHQ16775 308 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 LAMTOR1Q6IAA8 161 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 SDHCQ99643 169 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-231ENST00000641939 WFDC10AQ9H1F0 79 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 HIPK2Q9H2X6 1198 aa11.27□□□□□ -0.61
PHGDH-231ENST00000641939 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
PHGDH-231ENST00000641939 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 A0A1B0GU03 582 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 TSPAN4O14817 238 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 TMEM50AO95807 157 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 TNFRSF9Q07011 255 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 MLANAQ16655 118 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 CENPSQ8N2Z9 138 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 SPAG8Q99932 426 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-231ENST00000641939 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
PHGDH-231ENST00000641939 TRAV14DV4A0A0A6YYC5 116 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 CLN5O75503 358 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 SFT2D2O95562 160 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 PPP1R1AQ13522 171 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 TOMM20LQ6UXN7 152 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-231ENST00000641939 ZNF600Q6ZNG1 722 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 NOXA1Q86UR1 476 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 OR1S1Q8NH92 325 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
PHGDH-231ENST00000641939 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 GINS3Q9BRX5 216 aa11.25□□□□□ -0.61
PHGDH-231ENST00000641939 MRPL36Q9P0J6 103 aaKnown RBP11.25□□□□□ -0.61
PHGDH-231ENST00000641939 PUS1Q9Y606 427 aaKnown RBP eCLIP11.25□□□□□ -0.61
PHGDH-231ENST00000641939 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
PHGDH-231ENST00000641939 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
PHGDH-231ENST00000641939 CENPXA8MT69 81 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 CHEK1O14757 476 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 NDUFB6O95139 128 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
PHGDH-231ENST00000641939 NPY1RP25929 384 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 UBE2MP61081 183 aaKnown RBP11.24□□□□□ -0.61
PHGDH-231ENST00000641939 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 TMEM170AQ8WVE7 144 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 RNF2Q99496 336 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 RHPN1-AS1Q9BWJ2 59 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 RBKSQ9H477 322 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 U3KQ87 197 aa11.24□□□□□ -0.61
PHGDH-231ENST00000641939 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 IFNA10P01566 189 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 SLC25A4P12235 298 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 SLC25A6P12236 298 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 IL7P13232 177 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 C7orf50Q9BRJ6 194 aaKnown RBP11.23□□□□□ -0.61
PHGDH-231ENST00000641939 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 TMED3Q9Y3Q3 217 aa11.23□□□□□ -0.61
PHGDH-231ENST00000641939 OR4C46A6NHA9 309 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 PITX3O75364 302 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 BMI1P35226 326 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 RND2P52198 227 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
PHGDH-231ENST00000641939 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 BTCP35070 178 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-231ENST00000641939 TIGITQ495A1 244 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 VSIRQ9H7M9 311 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 UBQLN2Q9UHD9 624 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 FLVCR2Q9UPI3 526 aa11.21□□□□□ -0.61
PHGDH-231ENST00000641939 C9orf170A2RU37 121 aa11.2□□□□□ -0.62
PHGDH-231ENST00000641939 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
PHGDH-231ENST00000641939 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-231ENST00000641939 CD5P06127 495 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms