RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 HYLS1Q96M11 299 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 MS4A10Q96PG2 267 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 TENM2Q9NT68 2774 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 HSPB11Q9Y547 144 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 U3KQK5 164 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 PMS2P5A8MQ11 134 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 H3BUA1 57 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 OR2J3O76001 311 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 IGHG4P01861 327 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 HNRNPCP07910 306 aaKnown RBP eCLIP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 PF4V1P10720 104 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 HIST1H1BP16401 226 aaKnown RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 OPRK1P41145 380 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 EIF2B2P49770 351 aaKnown RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 NKX2-5P52952 324 aaPredicted RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 TPPP2P59282 170 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 SLC38A11Q08AI6 406 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 ARL16Q0P5N6 197 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 EXOSC2Q13868 293 aaKnown RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 C10orf99Q6UWK7 81 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 ACOT7LQ6ZUV0 252 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 SLC16A13Q7RTY0 426 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 CENPVQ7Z7K6 275 aaPredicted RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 NDUFA11Q86Y39 141 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 TMEM217Q8N7C4 229 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 OR10P1Q8NGE3 313 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 RNASEH2CQ8TDP1 164 aaKnown RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 DPF1Q92782 380 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 BSCL2Q96G97 398 aaPredicted RBP7.3□□□□□ -1.24
PHGDH-228ENST00000641847 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 MFFQ9GZY8 342 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 FBXL17Q9UF56 701 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
PHGDH-228ENST00000641847 IGHV3-21A0A0B4J1V1 117 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 RPS10-NUDT3A0A1W2PQS6 291 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 PRSS46E5RG02 174 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 NDUFB8O95169 186 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 MT-CO2P00403 227 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 TRGV3P03979 118 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 IGLL1P15814 213 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 CXCL2P19875 107 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 HBG1P69891 147 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 HBG2P69892 147 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 RHOGP84095 191 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 NHLH2Q02577 135 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 FOXE3Q13461 319 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 OR2F1Q13607 317 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 ZNF345Q14585 488 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 LILRB2Q8N423 598 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 C9orf62Q8N4C0 152 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 NECAP1Q8NC96 275 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 OR5C1Q8NGR4 320 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 SMIM3Q9BZL3 60 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 THYN1Q9P016 225 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 FBXL7Q9UJT9 491 aa7.29□□□□□ -1.24
PHGDH-228ENST00000641847 LYSTQ99698 3801 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 TRBV9A0A0B4J1U6 114 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 SMCO3A2RU48 225 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 MFSD2BA6NFX1 497 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 FAM223BA6NKX1 122 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 I3L2K1 104 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 K7EIM0 57 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 BRI3O95415 125 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 ELANEP08246 267 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 PSMB8P28062 276 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 GPX4P36969 197 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-228ENST00000641847 DLK1P80370 383 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 CLINT1Q14677 625 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 KLK9Q2XQG4 91 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 C15orf32Q32M92 178 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 TEX38Q6PEX7 206 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 FAM223AQ8IWN6 122 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 KCNRGQ8N5I3 272 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 COMMD1Q8N668 190 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 OR4X2Q8NGF9 303 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 PPP1R14BQ96C90 147 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 SLC35E1Q96K37 410 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 TMEM147Q9BVK8 224 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 GGACTQ9BVM4 153 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 KRTAP17-1Q9BYP8 105 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 GPR61Q9BZJ8 451 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 KLK15Q9H2R5 256 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 FNDC4Q9H6D8 234 aaPredicted RBP7.28□□□□□ -1.24
PHGDH-228ENST00000641847 SLA2Q9H6Q3 261 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 ZMAT5Q9UDW3 170 aaKnown RBP7.28□□□□□ -1.24
PHGDH-228ENST00000641847 KLK9Q9UKQ9 250 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
PHGDH-228ENST00000641847 A0A0D9SG52 128 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 UBE2L5PA0A1B0GUS4 154 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 WI2-2373I1.2A0A1W2PRP0 233 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 BCL2L11O43521 198 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 DFFBO76075 338 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 IGHV3-48P01763 117 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 IGHV3-23P01764 117 aa7.27□□□□□ -1.25
PHGDH-228ENST00000641847 RPLP1P05386 114 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms