RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 CORTO00230 105 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 YIF1AO95070 293 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 HOXB5P09067 269 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 IGHV4-30-4P0DP06 118 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
PHGDH-227ENST00000641811 OPRK1P41145 380 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 NPBWR1P48145 328 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 UBE2MP61081 183 aaKnown RBP13.04□□□□□ -0.32
PHGDH-227ENST00000641811 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 SLC24A4Q8NFF2 622 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
PHGDH-227ENST00000641811 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
PHGDH-227ENST00000641811 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
PHGDH-227ENST00000641811 LYRM1O43325 122 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 PITX3O75364 302 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 SCAF4O95104 1147 aaKnown RBP13.03□□□□□ -0.32
PHGDH-227ENST00000641811 TMEM50AO95807 157 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 OR4E1P0C645 316 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 RELQ04864 619 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-227ENST00000641811 GTSCR1Q86UQ5 136 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 SBSPONQ8IVN8 264 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 DTD1Q8TEA8 209 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 HIPK2Q9H2X6 1198 aa13.03□□□□□ -0.32
PHGDH-227ENST00000641811 ADAP1O75689 374 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 IFNA10P01566 189 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 CD7P09564 240 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 NPY1RP25929 384 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 CD81P60033 236 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 DHRS2Q13268 280 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 LINC00299Q6ZSB3 139 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 CCDC32Q9BV29 185 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 CACFD1Q9UGQ2 172 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 DNAH9Q9NYC9 4486 aa13.02□□□□□ -0.33
PHGDH-227ENST00000641811 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 PIGBOS1A0A0B4J2F0 54 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 C15orf62A8K5M9 175 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 K7EMT4 169 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 C4orf46Q504U0 113 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 TOMM20LQ6UXN7 152 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 OR4X1Q8NH49 305 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 WFDC10AQ9H1F0 79 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 PTTG2Q9NZH5 202 aa13.01□□□□□ -0.33
PHGDH-227ENST00000641811 CLN5O75503 358 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 IAPPP10997 89 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 SLC25A6P12236 298 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 PRSS54Q6PEW0 395 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 OR52B4Q8NGK2 314 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
PHGDH-227ENST00000641811 S100ZQ8WXG8 99 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 OR10C1Q96KK4 312 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 MAGT1Q9H0U3 335 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 C20orf85Q9H1P6 137 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 SMPXQ9UHP9 88 aa13□□□□□ -0.33
PHGDH-227ENST00000641811 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
PHGDH-227ENST00000641811 IGHV3OR16-13A0A075B7E8 117 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 IGHV3-74A0A0B4J1X5 117 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 RPS10-NUDT3A0A1W2PQS6 291 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 TCRBP04435 133 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 NHLRC4P0CG21 123 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-227ENST00000641811 RND2P52198 227 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 TIGITQ495A1 244 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 ZNF600Q6ZNG1 722 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
PHGDH-227ENST00000641811 DEFB125Q8N687 156 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 U3KQ87 197 aa12.99□□□□□ -0.33
PHGDH-227ENST00000641811 TRAV6A0A075B6T7 132 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 A8MZ25 164 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 IGKV1-17P01599 117 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 TMEM116Q8NCL8 245 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 COQ8AQ8NI60 647 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 ZFAND3Q9H8U3 227 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
PHGDH-227ENST00000641811 TRAV14DV4A0A0A6YYC5 116 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 FAM90A26D6RGX4 464 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 CHEK1O14757 476 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 SLC25A4P12235 298 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 NPIPB3Q92617 1050 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 ACY3Q96HD9 319 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 RNF2Q99496 336 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 NUDT15Q9NV35 164 aa12.97□□□□□ -0.33
PHGDH-227ENST00000641811 OR11H12B2RN74 326 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 WRBO00258 174 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 SYNGR2O43760 224 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-227ENST00000641811 IFNA4P05014 189 aa12.96□□□□□ -0.33
PHGDH-227ENST00000641811 IGLC1P0CG04 106 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms