RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TRAV5A0A0B4J249 113 aa14.29□□□□□ -0.12
PHGDH-226ENST00000641756 M0R1W7 72 aa14.29□□□□□ -0.12
PHGDH-226ENST00000641756 HNF1AP20823 631 aa14.29□□□□□ -0.12
PHGDH-226ENST00000641756 GALR1P47211 349 aa14.29□□□□□ -0.12
PHGDH-226ENST00000641756 SLC25A33Q9BSK2 321 aa14.29□□□□□ -0.12
PHGDH-226ENST00000641756 TCRBV4S1A1TA0A5B7 111 aa14.28□□□□□ -0.12
PHGDH-226ENST00000641756 PSMB11A5LHX3 300 aa14.28□□□□□ -0.12
PHGDH-226ENST00000641756 TEX22C9J3V5 150 aa14.28□□□□□ -0.12
PHGDH-226ENST00000641756 IGHV2-5P01817 119 aa14.28□□□□□ -0.12
PHGDH-226ENST00000641756 ZFP36P26651 326 aaKnown RBP14.28□□□□□ -0.12
PHGDH-226ENST00000641756 UBE2CO00762 179 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 MOSP00540 346 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 PFN1P07737 140 aaKnown RBP14.27□□□□□ -0.12
PHGDH-226ENST00000641756 PRTN3P24158 256 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 MMDQ15546 238 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 MRPL41Q8IXM3 137 aaKnown RBP14.27□□□□□ -0.12
PHGDH-226ENST00000641756 THAP8Q8NA92 274 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 OR5B12Q96R08 314 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 C19orf24Q9BVV8 132 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 TMEM167BQ9NRX6 74 aa14.27□□□□□ -0.12
PHGDH-226ENST00000641756 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 A6NNC1 897 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 C8orf88P0DMB2 117 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 TAS2R45P59539 299 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 SRSF12Q8WXF0 261 aaKnown RBP14.27□□□□□ -0.13
PHGDH-226ENST00000641756 ANAPC16Q96DE5 110 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 DNAJC4Q9NNZ3 241 aa14.27□□□□□ -0.13
PHGDH-226ENST00000641756 ODF3BA8MYP8 253 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 AP4M1O00189 453 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 COX7A2P2O60397 106 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 FBLN7Q53RD9 439 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 PQLC2Q6ZP29 291 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 VMO1Q7Z5L0 202 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 OR4X1Q8NH49 305 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 CFHR4Q92496 578 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 UHRF2Q96PU4 802 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 SLC25A2Q9BXI2 301 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 PVRIGQ6DKI7 326 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 PATE2Q6UY27 113 aa14.26□□□□□ -0.13
PHGDH-226ENST00000641756 CACNA1AO00555 2505 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 CRYGCP07315 174 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 S100PP25815 95 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 ETFRF1Q6IPR1 90 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 OR1P1Q8NH06 330 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 FAM167A-AS1Q96KT0 104 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 RNF5Q99942 180 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 MRPL32Q9BYC8 188 aaKnown RBP14.25□□□□□ -0.13
PHGDH-226ENST00000641756 DMRT1Q9Y5R6 373 aa14.25□□□□□ -0.13
PHGDH-226ENST00000641756 CEACAM3P40198 252 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 NDUFA6P56556 154 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 LCN2P80188 198 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 SSX2Q16385 188 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 C10orf113Q5VZT2 155 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 OR5AU1Q8NGC0 362 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 TNFRSF19Q9NS68 423 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 ZNF355PQ9NSJ1 428 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 F11RQ9Y624 299 aaKnown RBP14.24□□□□□ -0.13
PHGDH-226ENST00000641756 A0A1W2PPQ1 181 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BKO60814 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 CNIH1O95406 144 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BJP06899 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BOP23527 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 CRYBB3P26998 211 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BBP33778 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 EFNA4P52798 201 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BDP58876 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BCP62807 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HES1Q14469 280 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST2H2BEQ16778 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-226ENST00000641756 OCC1Q8TAD7 63 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 FRZBQ92765 325 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BHQ93079 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 C11orf52Q96A22 123 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BNQ99877 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 HIST1H2BMQ99879 126 aa14.24□□□□□ -0.13
PHGDH-226ENST00000641756 GSX1Q9H4S2 264 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-226ENST00000641756 NBR2O15453 112 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 DYNAPQ8N1N2 210 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 OR1L4Q8NGR5 311 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 PFDN5Q99471 154 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 RNF2Q99496 336 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 GGTLC3B5MD39 225 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 PYYP10082 97 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 BPIFB3P59826 476 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 UBE2L3P68036 154 aaKnown RBP14.23□□□□□ -0.13
PHGDH-226ENST00000641756 PYGO2Q9BRQ0 406 aa14.23□□□□□ -0.13
PHGDH-226ENST00000641756 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 HOXB4P17483 251 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-226ENST00000641756 ORM2P19652 201 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 SELENOTP62341 195 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 C22orf15Q8WYQ4 148 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 SFRP2Q96HF1 295 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 EAF1Q96JC9 268 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-226ENST00000641756 C12orf57Q99622 126 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
PHGDH-226ENST00000641756 ARL2-SNX15V9GYD0 113 aa14.22□□□□□ -0.13
PHGDH-226ENST00000641756 MDFIC2A0A1B0GVS7 189 aa14.21□□□□□ -0.13
PHGDH-226ENST00000641756 ZNF98A6NK75 572 aa14.21□□□□□ -0.13
PHGDH-226ENST00000641756 SNRPCP09234 159 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms