RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	CNTFR	P26992	372 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	YPEL3	P61236	119 aa	Predicted RBP	13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	OR5AN1	Q8NGI8	311 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	OR5B3	Q8NH48	314 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	MS4A10	Q96PG2	267 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	GAL3ST2	Q9H3Q3	398 aa		13.59	□□□□□ -0.23
PHGDH-223	ENST00000641597	MT-CO2	P00403	227 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	GCG	P01275	180 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	APOA2	P02652	100 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	PAX1	P15863	534 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	TDGF1P3	P51864	188 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597		Q6ZWC4	215 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	OR5AU1	Q8NGC0	362 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	PSMB11	A5LHX3	300 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597		C9JCJ5	164 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	ENSA	O43768	121 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	MOS	P00540	346 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	OR5G3	P0C626	314 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	CDKN1A	P38936	164 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	UBE2L3	P68036	154 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	DNLZ	Q5SXM8	178 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	MRPL54	Q6P161	138 aa	Known RBP	13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	PATE2	Q6UY27	113 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	SLC35E1	Q96K37	410 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	TMEM106B	Q9NUM4	274 aa		13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.58	□□□□□ -0.24
PHGDH-223	ENST00000641597		H3BTX0	84 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	PRRG2	O14669	202 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	IGLV2-23	P01705	113 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	LOX	P28300	417 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	RPEL1	Q2QD12	228 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	ZNF600	Q6ZNG1	722 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	OR1L8	Q8NGR8	309 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	CMTM2	Q8TAZ6	248 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	GSX1	Q9H4S2	264 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	CBLN4	Q9NTU7	201 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	SERTAD4	Q9NUC0	356 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	EREG	O14944	169 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	OSR1	Q8TAX0	266 aa	Predicted RBP	13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	ZNF355P	Q9NSJ1	428 aa		13.57	□□□□□ -0.24
PHGDH-223	ENST00000641597	IGKV1D-37	A0A075B6S9	117 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	MKRN2OS	H3BPM6	223 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	CRISP2	P16562	243 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	RAB4B	P61018	213 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	GNG5	P63218	68 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	GFRAL	Q6UXV0	394 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	TMEM167B	Q9NRX6	74 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597		A0A1W2PPI3	338 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	C8orf88	P0DMB2	117 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	USF2	Q15853	346 aa	Predicted RBP	13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	MRGPRG-AS1	Q2M3A8	158 aa		13.56	□□□□□ -0.24
PHGDH-223	ENST00000641597	DLL1	O00548	723 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	NDUFB3	O43676	98 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	TMEM177	Q53S58	311 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	PRSS33	Q8NF86	280 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	BTF3L4	Q96K17	158 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	FAM103A1	Q9BTL3	118 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597		E7EQL1	145 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	ZNF705D	P0CH99	300 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	ZNF705B	P0CI00	300 aa	Predicted RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	MFAP2	P55001	183 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	ERH	P84090	104 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	OR4C13	Q8NGP0	309 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	RNASE6	Q93091	150 aa	Known RBP	13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	ST6GALNAC6	Q969X2	333 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	RCHY1	Q96PM5	261 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	NAT8B	Q9UHF3	227 aa		13.55	□□□□□ -0.24
PHGDH-223	ENST00000641597	LEMD1	Q68G75	181 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	BAGE3	Q86Y29	109 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	BAGE2	Q86Y30	109 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	C11orf42	Q8N5U0	333 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	IGF2BP2-AS1	Q96M15	143 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	TBX15	Q96SF7	602 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	HSPB9	Q9BQS6	159 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	ATG101	Q9BSB4	218 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	GNB4	Q9HAV0	340 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	DNAJC4	Q9NNZ3	241 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	NAGK	Q9UJ70	344 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	FNDC10	F2Z333	226 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	IQCJ	Q1A5X6	159 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	TIGIT	Q495A1	244 aa		13.54	□□□□□ -0.24
PHGDH-223	ENST00000641597	C22orf46	C9J442	243 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	COX7A2P2	O60397	106 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	ORM2	P19652	201 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	SELENOT	P62341	195 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	MEF2C	Q06413	473 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	PRR27	Q6MZM9	219 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	TMEM167A	Q8TBQ9	72 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	BLNK	Q8WV28	456 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	DYNLRB1	Q9NP97	96 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	SHISA9	B4DS77	424 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	TNFRSF13B	O14836	293 aa	Predicted RBP	13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	DLX6	P56179	175 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	RAN	P62826	216 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	LRRC10	Q5BKY1	277 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	IBA57	Q5T440	356 aa	Known RBP	13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	TOMM20L	Q6UXN7	152 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	TGIF2LX	Q8IUE1	241 aa		13.53	□□□□□ -0.24

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