RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MRPL36Q9P0J6 103 aaKnown RBP7.06□□□□□ -1.28
SCARB2-225ENST00000640900 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 VWFP04275 2813 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.05□□□□□ -1.28
SCARB2-225ENST00000640900 A0A0G2JLM5 398 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 MFSD2BA6NFX1 497 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 I3L521 148 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 CYB5BO43169 146 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 TRGV3P03979 118 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 OR8U8P0C7N1 319 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 CD28P10747 220 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 RPL12P30050 165 aaKnown RBP7.05□□□□□ -1.28
SCARB2-225ENST00000640900 RIPPLY3P57055 190 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 DLK1P80370 383 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 NHLH2Q02577 135 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 GAMTQ14353 236 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 ZNF345Q14585 488 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 MLANAQ16655 118 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 C15orf32Q32M92 178 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 LCNL1Q6ZST4 164 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 ACOT7LQ6ZUV0 252 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 ZNF546Q86UE3 836 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 SCARB1Q8WTV0 552 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 TMEM158Q8WZ71 300 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 CXorf58Q96LI9 332 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 HYLS1Q96M11 299 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 CCDC140Q96MF4 163 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 SLC25A31Q9H0C2 315 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 LSM4Q9Y4Z0 139 aaKnown RBP7.05□□□□□ -1.28
SCARB2-225ENST00000640900 HSPB11Q9Y547 144 aa7.05□□□□□ -1.28
SCARB2-225ENST00000640900 IGKV1OR2-108A0A075B7D4 117 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 RPS10-NUDT3A0A1W2PQS6 291 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 CST7O76096 145 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 IFNA4P05014 189 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 PF4V1P10720 104 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 CXCL2P19875 107 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 CD33P20138 364 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 S100A11P31949 105 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 CAV2P51636 162 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 TPPP2P59282 170 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 ATP5G2Q06055 141 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 OR2F1Q13607 317 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 FAM209BQ5JX69 171 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 LAMTOR1Q6IAA8 161 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 SLC16A13Q7RTY0 426 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 THAP8Q8NA92 274 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 OR10P1Q8NGE3 313 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 OR4X2Q8NGF9 303 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 DCUN1D4Q92564 292 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
SCARB2-225ENST00000640900 MISP3Q96FF7 219 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 MS4A10Q96PG2 267 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 CITED2Q99967 270 aaPredicted RBP7.04□□□□□ -1.28
SCARB2-225ENST00000640900 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
SCARB2-225ENST00000640900 IGKV1D-37A0A075B6S9 117 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 FXYD6-FXYD2A0A087WZ82 144 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 IGKV1-17P01599 117 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 CTSGP08311 255 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 LGALS1P09382 135 aaKnown RBP7.03□□□□□ -1.28
SCARB2-225ENST00000640900 ADMP35318 185 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 MFAP4P55083 255 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 DEFA5Q01523 94 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 TNP2Q05952 138 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 SLC38A11Q08AI6 406 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 LGALSLQ3ZCW2 172 aaPredicted RBP7.03□□□□□ -1.28
SCARB2-225ENST00000640900 ETFRF1Q6IPR1 90 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 TMEM144Q7Z5S9 345 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 NDUFA11Q86Y39 141 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 STX12Q86Y82 276 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 KCNRGQ8N5I3 272 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 C4orf3Q8WVX3 66 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 PARD6GQ9BYG4 376 aaPredicted RBP7.03□□□□□ -1.28
SCARB2-225ENST00000640900 GNB4Q9HAV0 340 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 ZNF355PQ9NSJ1 428 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 C21orf62Q9NYP8 219 aa7.03□□□□□ -1.28
SCARB2-225ENST00000640900 TSSC4Q9Y5U2 329 aaPredicted RBP7.03□□□□□ -1.28
SCARB2-225ENST00000640900 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 A0A0D9SG52 128 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 TCRBV4S1A1TA0A5B7 111 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 CLN5O75503 358 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 TRBV12-3P01733 135 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 IGLC1P0CG04 106 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 OPRK1P41145 380 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 HBG1P69891 147 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 HBG2P69892 147 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 FHL3Q13643 280 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 OR8G2PQ6IF36 304 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 C18orf65Q6ZTR6 163 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 C9orf62Q8N4C0 152 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 TMEM217Q8N7C4 229 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
SCARB2-225ENST00000640900 OR1S2Q8NGQ3 325 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 OR5C1Q8NGR4 320 aa7.02□□□□□ -1.29
SCARB2-225ENST00000640900 EEF1AKMT3Q96AZ1 226 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms