RNA–Protein interactions for RNA: ENST00000638696.1

PAX6-237, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-237ENST00000638696 TMEM128Q5BJH2 165 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 LAMTOR1Q6IAA8 161 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 DEFB125Q8N687 156 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 OR52B4Q8NGK2 314 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 HIPK2Q9H2X6 1198 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 SHPKQ9UHJ6 478 aa9.96□□□□□ -0.82
PAX6-237ENST00000638696 DNAH9Q9NYC9 4486 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 LINC00854A0A1B0GVQ3 168 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 TMEM50AO95807 157 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 CCR6P51684 374 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 SMCO1Q147U7 214 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 BAK1Q16611 211 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 MLANAQ16655 118 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 PVRIGQ6DKI7 326 aa9.95□□□□□ -0.82
PAX6-237ENST00000638696 TRAV14DV4A0A0A6YYC5 116 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 RPS10-NUDT3A0A1W2PQS6 291 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 HAGHQ16775 308 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 NOXA1Q86UR1 476 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 CENPSQ8N2Z9 138 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 SRD5A3Q9H8P0 318 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
PAX6-237ENST00000638696 IGHV3-49A0A0A0MS15 119 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 A0A1B0GU03 582 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 CENPXA8MT69 81 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 SCGB2A1O75556 95 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 IFNA10P01566 189 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 TNFRSF9Q07011 255 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 RBMS2Q15434 407 aaKnown RBP9.93□□□□□ -0.82
PAX6-237ENST00000638696 BSXQ3C1V8 233 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 C2orf83Q53S99 150 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 TOMM20LQ6UXN7 152 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 TMEM116Q8NCL8 245 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 SLC24A4Q8NFF2 622 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 OR10C1Q96KK4 312 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 GINS3Q9BRX5 216 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 RHPN1-AS1Q9BWJ2 59 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 WFDC10AQ9H1F0 79 aa9.93□□□□□ -0.82
PAX6-237ENST00000638696 FNDC4Q9H6D8 234 aaPredicted RBP9.93□□□□□ -0.82
PAX6-237ENST00000638696 DUXBA0A1W2PPF3 345 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 TSPAN4O14817 238 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 CLN5O75503 358 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 SFT2D2O95562 160 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 ZNF600Q6ZNG1 722 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 OR4X1Q8NH49 305 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
PAX6-237ENST00000638696 DTD1Q8TEA8 209 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 SPAG8Q99932 426 aaPredicted RBP9.92□□□□□ -0.82
PAX6-237ENST00000638696 SPATA25Q9BR10 227 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 RBKSQ9H477 322 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 HSPB7Q9UBY9 170 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 PUS1Q9Y606 427 aaKnown RBP eCLIP9.92□□□□□ -0.82
PAX6-237ENST00000638696 U3KQ87 197 aa9.92□□□□□ -0.82
PAX6-237ENST00000638696 RYR2Q92736 4967 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 IGHV3OR16-13A0A075B7E8 117 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 TRAV30A0A087WSZ9 112 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 IGHV3-74A0A0B4J1X5 117 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 RBMY1BA6NDE4 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-237ENST00000638696 RBMY1EA6NEQ0 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-237ENST00000638696 CHEK1O14757 476 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 RBMY1DP0C7P1 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-237ENST00000638696 NPY1RP25929 384 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 BMI1P35226 326 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 PPP1R1AQ13522 171 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 ETFRF1Q6IPR1 90 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 LRTM2Q8N967 370 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 RNF2Q99496 336 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 SDHCQ99643 169 aaPredicted RBP9.91□□□□□ -0.82
PAX6-237ENST00000638696 KRTAP17-1Q9BYP8 105 aa9.91□□□□□ -0.82
PAX6-237ENST00000638696 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
PAX6-237ENST00000638696 IGKV3-7A0A075B6H7 116 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 OR4C46A6NHA9 309 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 NDUFB6O95139 128 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 IFNA4P05014 189 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 HOXB5P09067 269 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 SLC25A4P12235 298 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 NPPCP23582 126 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.82
PAX6-237ENST00000638696 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
PAX6-237ENST00000638696 ZNF414Q96IQ9 312 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 TMED3Q9Y3Q3 217 aa9.9□□□□□ -0.82
PAX6-237ENST00000638696 SLC25A6P12236 298 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 IL7P13232 177 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 TFPI2P48307 235 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 RND2P52198 227 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 RPL11P62913 178 aaKnown RBP9.89□□□□□ -0.83
PAX6-237ENST00000638696 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 TIGITQ495A1 244 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 PRSS54Q6PEW0 395 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 C7orf50Q9BRJ6 194 aaKnown RBP9.89□□□□□ -0.83
PAX6-237ENST00000638696 UBQLN2Q9UHD9 624 aa9.89□□□□□ -0.83
PAX6-237ENST00000638696 LOC102724200A0A096LPH7 203 aaPredicted RBP9.88□□□□□ -0.83
PAX6-237ENST00000638696 IGHV3-66A0A0C4DH42 116 aa9.88□□□□□ -0.83
PAX6-237ENST00000638696 C9orf170A2RU37 121 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms