RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 CRPP02741 224 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 IGFBP2P18065 325 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 MIR17HGQ75NE6 70 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 AMELYQ99218 206 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
CACNA1A-242ENST00000637485 SLAQ13239 276 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 LCN12Q6JVE5 192 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 GPHA2Q96T91 129 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 TMEM126AQ9H061 195 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 MMP23AO75900 390 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 PAX1P15863 534 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 C18orf12Q96KH6 178 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 ASCL2Q99929 193 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 J3KT08 172 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 UCP2P55851 309 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 KCNK17Q96T54 332 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 Q9H3A6 140 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 TMEM74BQ9NUR3 256 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 IDI2-AS1Q9NZ38 188 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 CNTRLQ7Z7A1 2325 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 hCG_38984A0A1B0GV85 526 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 C9JCJ5 164 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 NPIPB11E5RHQ5 1161 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 SAA1P0DJI8 122 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 NPPCP23582 126 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 LAGE3Q14657 143 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 APOBEC4Q8WW27 367 aaKnown RBP8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 WFDC6Q9BQY6 131 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 LY96Q9Y6Y9 160 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 EPOPA6NHQ4 379 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 IGHMP01871 453 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 ZNF688P0C7X2 276 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 ETDBQ3ZM63 59 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 ZNF114Q8NC26 417 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 FGF11Q92914 225 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 TM2D1Q9BX74 207 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 TTTY12Q9BZ98 90 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 CALYQ9NYX4 217 aa8.16□□□□□ -1.1
CACNA1A-242ENST00000637485 IGHV3OR15-7A0A075B7D8 119 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 PATE3B3GLJ2 98 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 SPINK2P20155 84 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 ASPHD2Q6ICH7 369 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 SLC25A47Q6Q0C1 308 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 SLC25A45Q8N413 288 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 PRDM14Q9GZV8 571 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 THY1P04216 161 aa8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 ZNF385AQ96PM9 386 aaKnown RBP8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 NUP214P35658 2090 aaPredicted RBP8.15□□□□□ -1.1
CACNA1A-242ENST00000637485 H0YIZ8 118 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 PTGDSP41222 190 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 Q0VG73 95 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 SAP25Q8TEE9 199 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 A0A0J9YW62 118 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 F2Z2F3 143 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 IGLC2P0DOY2 106 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 IGLC3P0DOY3 106 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 SLC25A53Q5H9E4 307 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 SLX1AQ9BQ83 275 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 PILRBQ9UKJ0 227 aa8.15□□□□□ -1.11
CACNA1A-242ENST00000637485 PRSS47A8MTI9 375 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 PSG4Q00888 419 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 NPIPB13A6NJU9 1138 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 ZNHIT1O43257 154 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 GFRA3O60609 400 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 LINC01551Q86U37 167 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 LCTP09848 1927 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 TRBV6-7A0A0A0MS04 114 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 A0A1W2PR77 199 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 SP9P0CG40 484 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 FAM106CPP0CH98 169 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 FAM106AQ4KMX7 169 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 A0A0G2JMZ2 1700 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 LRRC37A2A6NM11 1700 aa8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 SNRPD3P62318 126 aaKnown RBP8.14□□□□□ -1.11
CACNA1A-242ENST00000637485 EGR4Q05215 589 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 LAMTOR3Q9UHA4 124 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 SELLP14151 372 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 RBM3P98179 157 aaKnown RBP8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 SOCS3O14543 225 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 CD3EP07766 207 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 OR5P3Q8WZ94 311 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 IGLV3-19P01714 112 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
CACNA1A-242ENST00000637485 IGKV1D-42A0A075B6H8 117 aa8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 CRIPAKQ8N1N5 446 aa8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 LINC01590Q5TEZ4 76 aa8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 SPAG17Q6Q759 2223 aa8.12□□□□□ -1.11
CACNA1A-242ENST00000637485 DMRTC2Q8IXT2 367 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms