RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 BPIFB3P59826 476 aa12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 IBA57Q5T440 356 aaKnown RBP12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 OR5AU1Q8NGC0 362 aa12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 CCL17Q92583 94 aa12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 FNDC4Q9H6D8 234 aaPredicted RBP12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 POLR3KQ9Y2Y1 108 aaPredicted RBP12.98□□□□□ -0.33
CHRNA7-221ENST00000636898 A0A1B0GV90 55 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 DLX6P56179 175 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 VMA21Q3ZAQ7 101 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 MORN5Q5VZ52 161 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 ZNF292O60281 2723 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 TMEM155Q4W5P6 130 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 LYPD2Q6UXB3 125 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 TGIF2LXQ8IUE1 241 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 ZNF355PQ9NSJ1 428 aa12.97□□□□□ -0.33
CHRNA7-221ENST00000636898 MGAQ8IWI9 3026 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 IGKV1D-37A0A075B6S9 117 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 TRAV5A0A0B4J249 113 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 FRMD6-AS1P0C7T7 363 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 LGALS7P47929 136 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 DIAPH2-AS1Q14236 149 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 TMEM136Q6ZRR5 245 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 Q6ZWC4 215 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 NPIPB3Q92617 1050 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 MISP3Q96FF7 219 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 PAXXQ9BUH6 204 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 CTSZQ9UBR2 303 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 NAT8BQ9UHF3 227 aa12.96□□□□□ -0.33
CHRNA7-221ENST00000636898 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 FXYD3Q14802 87 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 C10orf55Q5SWW7 151 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 FSTL3O95633 263 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 HLA-DQA1P01909 254 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 AMY1AP04745 511 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 MGST1P10620 155 aaKnown RBP12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 FAM231DQ6ZW35 169 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 NGBQ9NPG2 151 aa12.95□□□□□ -0.34
CHRNA7-221ENST00000636898 SNRPCP09234 159 aaKnown RBP12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 IGHV1-8P0DP01 117 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 TBX15Q96SF7 602 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF835Q9Y2P0 537 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 CEP250Q9BV73 2442 aa12.94□□□□□ -0.34
CHRNA7-221ENST00000636898 A0A1W2PPI3 338 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 SLC25A17O43808 307 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 BRS3P32247 399 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 TPTE2P1Q5T6R2 138 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 TEX43Q6ZNM6 134 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF329Q86UD4 541 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 GNB4Q9HAV0 340 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 ZGRF1Q86YA3 2104 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 IZUMO1RA6ND01 250 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF705FA8MVS1 300 aaPredicted RBP12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 PEX7O00628 323 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 CRYGCP07315 174 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF705DP0CH99 300 aaPredicted RBP12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 ZNF705BP0CI00 300 aaPredicted RBP12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 PYYP10082 97 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 MRGPRG-AS1Q2M3A8 158 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 TEX45Q8NA69 505 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 SAMD10Q9BYL1 202 aa12.93□□□□□ -0.34
CHRNA7-221ENST00000636898 SMG1Q96Q15 3661 aaKnown RBP12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 BSNQ9UPA5 3926 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 Q8NA96 180 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 TMEM133Q9H2Q1 129 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 NAV3Q8IVL0 2385 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 IGLC7A0M8Q6 106 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 SHISA9B4DS77 424 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 F2Z2F3 143 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 MYCNOSP40205 109 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 TCL1AP56279 114 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 TCF15Q12870 199 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 TOMM20LQ6UXN7 152 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 LINC00305Q7Z4B0 112 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 C11orf42Q8N5U0 333 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 CHRDL1Q9BU40 450 aa12.92□□□□□ -0.34
CHRNA7-221ENST00000636898 MRPL36Q9P0J6 103 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms