RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 C2orf83Q53S99 150 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 UXS1Q8NBZ7 420 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
LIN28B-202ENST00000635857 B9D2Q9BPU9 175 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 CHRDL1Q9BU40 450 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 LSM4Q9Y4Z0 139 aaKnown RBP12.92□□□□□ -0.34
LIN28B-202ENST00000635857 U3KQ87 197 aa12.92□□□□□ -0.34
LIN28B-202ENST00000635857 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 CTSGP08311 255 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
LIN28B-202ENST00000635857 DHRS2Q13268 280 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 GUCA2BQ16661 112 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 DEFB114Q30KQ6 69 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 TM4SF20Q53R12 229 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
LIN28B-202ENST00000635857 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 GINS3Q9BRX5 216 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 RBKSQ9H477 322 aa12.91□□□□□ -0.34
LIN28B-202ENST00000635857 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
LIN28B-202ENST00000635857 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
LIN28B-202ENST00000635857 PLA2G10O15496 165 aa12.9□□□□□ -0.34
LIN28B-202ENST00000635857 SLC25A4P12235 298 aa12.9□□□□□ -0.34
LIN28B-202ENST00000635857 ADMP35318 185 aa12.9□□□□□ -0.34
LIN28B-202ENST00000635857 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
LIN28B-202ENST00000635857 RPP30P78346 268 aaKnown RBP12.9□□□□□ -0.34
LIN28B-202ENST00000635857 BTNL8Q6UX41 500 aa12.9□□□□□ -0.34
LIN28B-202ENST00000635857 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
LIN28B-202ENST00000635857 PRKDCP78527 4128 aaKnown RBP12.9□□□□□ -0.35
LIN28B-202ENST00000635857 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 WRBO00258 174 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 TCRBP04435 133 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 IFNA4P05014 189 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 BMI1P35226 326 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 LAMTOR1Q6IAA8 161 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 ZNF600Q6ZNG1 722 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 NUDT15Q9NV35 164 aa12.89□□□□□ -0.35
LIN28B-202ENST00000635857 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
LIN28B-202ENST00000635857 TRAV6A0A075B6T7 132 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 K7EMT4 169 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 CLN5O75503 358 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 EDN2P20800 178 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 CD81P60033 236 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 RAB11AP62491 216 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 ADAMTSL5Q6ZMM2 481 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 SLC16A13Q7RTY0 426 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 OR4X1Q8NH49 305 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 ENKURQ8TC29 256 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 MLXQ9UH92 298 aa12.88□□□□□ -0.35
LIN28B-202ENST00000635857 IGHV3OR16-8A0A075B7F1 116 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 IZUMO1RA6ND01 250 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 PITX3O75364 302 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 TMEM50AO95807 157 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 C8orf88P0DMB2 117 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 IAPPP10997 89 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
LIN28B-202ENST00000635857 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
LIN28B-202ENST00000635857 TRAV14DV4A0A0A6YYC5 116 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
LIN28B-202ENST00000635857 SYNGR2O43760 224 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 ADAP1O75689 374 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 UPK1BO75841 260 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
LIN28B-202ENST00000635857 RND2P52198 227 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 ASAH1Q13510 395 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
LIN28B-202ENST00000635857 WDR89Q96FK6 387 aaPredicted RBP12.86□□□□□ -0.35
LIN28B-202ENST00000635857 NARS2Q96I59 477 aaKnown RBP12.86□□□□□ -0.35
LIN28B-202ENST00000635857 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
LIN28B-202ENST00000635857 SCAF4O95104 1147 aaKnown RBP12.85□□□□□ -0.35
LIN28B-202ENST00000635857 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 OR52B4Q8NGK2 314 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 OR1S2Q8NGQ3 325 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 MITD1Q8WV92 249 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 ACY3Q96HD9 319 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 SLC35E1Q96K37 410 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 NEURL2Q9BR09 285 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 MAGT1Q9H0U3 335 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 TGP01266 2768 aa12.85□□□□□ -0.35
LIN28B-202ENST00000635857 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 IGHV4-30-4P0DP06 118 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 OR10J1P30954 320 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
LIN28B-202ENST00000635857 DEFA1P59665 94 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 DEFA3P59666 94 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 MLANAQ16655 118 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 IAH1Q2TAA2 248 aaPredicted RBP12.84□□□□□ -0.35
LIN28B-202ENST00000635857 PRSS54Q6PEW0 395 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
LIN28B-202ENST00000635857 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms