RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 TRAF3IP2O43734 574 aaPredicted RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 DEDDO75618 318 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CD5P06127 495 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CTSDP07339 412 aaPredicted RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 ZNF708P17019 499 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 DTYMKP23919 212 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 NFYBP25208 207 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CXCL6P80162 114 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 IL15RAQ13261 267 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 KISS1Q15726 138 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 C2orf66Q6UXQ4 117 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 OR2G3Q8NGZ4 309 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 PP6455Q8WZ26 134 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 SIGLEC12Q96PQ1 595 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CMSS1Q9BQ75 279 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 MAP1LC3AQ9H492 121 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CCL28Q9NRJ3 127 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 PTPRQQ9UMZ3 2332 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 IGLV3-32A0A0A0MS00 114 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 H0Y9J4 135 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 RER1O15258 196 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 DHRS3O75911 302 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 S100A8P05109 93 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 HIST1H1EP10412 219 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 FAM3AP98173 230 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 APCDD1LQ8NCL9 501 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 MAFIPQ8WZ33 124 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 RPUSD4Q96CM3 377 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 ZNF2Q9BSG1 426 aaPredicted RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 MS4A6AQ9H2W1 248 aa5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 LSM5Q9Y4Y9 91 aaKnown RBP5.6□□□□□ -1.51
SMARCA2-243ENST00000635590 ALPK2Q86TB3 2170 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 IGKV1-9A0A0C4DH69 117 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 CRYM-AS1A6NIL9 109 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 COLCA2A8K830 154 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 SLC31A2O15432 143 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 MMP7P09237 267 aaPredicted RBP5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 IGHV3-43DP0DP04 118 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 FKBP2P26885 142 aaKnown RBP5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 PMELP40967 661 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 ZNF239Q16600 458 aaKnown RBP5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 RNF212Q495C1 297 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 UBAC2Q8NBM4 344 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 BLNKQ8WV28 456 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 FBXO17Q96EF6 278 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 TCEAL7Q9BRU2 100 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 CHST5Q9GZS9 411 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 EDA2RQ9HAV5 297 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 RPS10P5Q9NQ39 176 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 CACFD1Q9UGQ2 172 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 HDGFL3Q9Y3E1 203 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 V9GYS6 101 aa5.59□□□□□ -1.51
SMARCA2-243ENST00000635590 COL6A6A6NMZ7 2263 aa5.59□□□□□ -1.52
SMARCA2-243ENST00000635590 CELSR3Q9NYQ7 3312 aa5.59□□□□□ -1.52
SMARCA2-243ENST00000635590 ARID1BQ8NFD5 2236 aaPredicted RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 IGLV3-12A0A075B6K2 115 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZG16O60844 167 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 IGLV3-1P01715 115 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 MT-ND4LP03901 98 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 SEC11BP0C7V7 166 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 GABRR1P24046 479 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 EIF1P41567 113 aaKnown RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 RAB5CP51148 216 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZNF138P52744 262 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 RP1P56715 2156 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 TMEM33P57088 247 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZNF616Q08AN1 781 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 HIST3H3Q16695 136 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ABCA11PQ4W5N1 156 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 PRR30Q53SZ7 412 aaPredicted RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 TTC32Q5I0X7 151 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 OR2M3Q8NG83 312 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 SPTSSAQ969W0 71 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 HIST1H2BAQ96A08 127 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 PBDC1Q9BVG4 233 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 SMIM3Q9BZL3 60 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 CABIN1Q9Y6J0 2220 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 LOC102725191A0A1B0GVB3 256 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZNF14P17017 642 aaPredicted RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 COX7A1P24310 79 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 SNCAP37840 140 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 RHEBQ15382 184 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 C6orf201Q7Z4U5 140 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZNF561Q8N587 486 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 GALNT14Q96FL9 552 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 GINS3Q9BRX5 216 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 SUCNR1Q9BXA5 334 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 NAA60Q9H7X0 242 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 TUBA4BQ9H853 241 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 ZDHHC11Q9H8X9 412 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 MCTS1Q9ULC4 181 aaKnown RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 TP53TG5Q9Y2B4 290 aa5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 F11RQ9Y624 299 aaKnown RBP5.58□□□□□ -1.52
SMARCA2-243ENST00000635590 KNL1Q8NG31 2342 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms