RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 IFNA10P01566 189 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 P2RY1P47900 373 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 SPINK9Q5DT21 86 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 LPCAT3Q6P1A2 487 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 S100A16Q96FQ6 103 aaKnown RBP11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
PDLIM3-213ENST00000629667 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 IFNA21P01568 189 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 IFNA17P01571 189 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 CRYBB3P26998 211 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 EIF2B2P49770 351 aaKnown RBP11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 UBE2DNLQ8IWF7 75 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 ANAPC10Q9UM13 185 aa11.24□□□□□ -0.61
PDLIM3-213ENST00000629667 IGLV2-18A0A075B6J9 118 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 CORTO00230 105 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 NAT1P18440 290 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 PPP5CP53041 499 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 TSPAN5P62079 268 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 DHRS2Q13268 280 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 KCTD21Q4G0X4 260 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
PDLIM3-213ENST00000629667 TMEM127O75204 238 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 CLN5O75503 358 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 HLA-DMAP28067 261 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 HRH1P35367 487 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
PDLIM3-213ENST00000629667 HELTA6NFD8 242 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 PRSS3P35030 304 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 OPRK1P41145 380 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 TAS2R20P59543 309 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 UBE2NLQ5JXB2 153 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
PDLIM3-213ENST00000629667 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 AP2S1P53680 142 aaPredicted RBP11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 LYSMD2Q8IV50 215 aa11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 OR4X1Q8NH49 305 aa11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
PDLIM3-213ENST00000629667 CD74P04233 296 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 RNASE2P10153 161 aaKnown RBP11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 HOXA1P49639 335 aaPredicted RBP11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 AKR1C2P52895 323 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 EMP1P54849 157 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 SNRPD3P62318 126 aaKnown RBP11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 MLANAQ16655 118 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 Q6ZR54 194 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 Q6ZRM9 215 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 FNDC4Q9H6D8 234 aaPredicted RBP11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
PDLIM3-213ENST00000629667 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 ETV6P41212 452 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 UCP3P55916 312 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 TIGITQ495A1 244 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 SAMD12Q8N8I0 201 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 FAM210BQ96KR6 192 aa11.18□□□□□ -0.62
PDLIM3-213ENST00000629667 HSPG2P98160 4391 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 A0A0B4J293 547 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 IGKV1-17P01599 117 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 IGKV1-5P01602 117 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 RPL5P46777 297 aaKnown RBP11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 C1orf134Q5TEV5 83 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 Q8WTZ3 238 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 GLMPQ8WWB7 406 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 NEU1Q99519 415 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 U3KQE9 123 aa11.17□□□□□ -0.62
PDLIM3-213ENST00000629667 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 FAM90A26D6RGX4 464 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 H3BMM0 161 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 ATG12O94817 140 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 RNF212Q495C1 297 aa11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
PDLIM3-213ENST00000629667 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
PDLIM3-213ENST00000629667 RPS10-NUDT3A0A1W2PQS6 291 aa11.15□□□□□ -0.62
PDLIM3-213ENST00000629667 PGAM2P15259 253 aa11.15□□□□□ -0.62
PDLIM3-213ENST00000629667 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
PDLIM3-213ENST00000629667 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms