RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CEACAM6P40199 344 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 VDAC2P45880 294 aaPredicted RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 BRWD1-AS2P59051 145 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 RAB5BP61020 215 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 SOHLH1Q5JUK2 328 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 AKR1C8PQ5T2L2 129 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM14EPQ6UXP3 125 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF788Q6ZQV5 615 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 CENPVQ7Z7K6 275 aaPredicted RBP3.83□□□□□ -1.8
LINC00550-201ENST00000629293 OR5AU1Q8NGC0 362 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 OR1L1Q8NH94 360 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 C8orf46Q8TAG6 207 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 SFT2D1Q8WV19 159 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 MBD3L1Q8WWY6 194 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 PRSS22Q9GZN4 317 aa3.83□□□□□ -1.8
LINC00550-201ENST00000629293 A0A1B0GV50 99 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 WI2-2373I1.2A0A1W2PRP0 233 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 A0A1W2PRV1 198 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 TCRBV4S1A1TA0A5B7 111 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF320A2RRD8 509 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 USP17L23D6RBM5 183 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 M0R036 132 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 M0R1W7 72 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 IFNA5P01569 189 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RAB5AP20339 215 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 TNFRSF9Q07011 255 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 KHDC3LQ587J8 217 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ZFP82Q8N141 532 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 TPRX1Q8N7U7 411 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 UBALD1Q8TB05 177 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ISOC2Q96AB3 205 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 C20orf24Q9BUV8 137 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 SEBOXQ9HB31 216 aaPredicted RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 PSENENQ9NZ42 101 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 C1orf196B1AJZ1 125 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 H3BQ15 152 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 K7EIL1 84 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 HBZP02008 142 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 METTL15P1P0C7V9 234 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 IAPPP10997 89 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RPL30P62888 115 aaKnown RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ASPHD1Q5U4P2 390 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 C10orf99Q6UWK7 81 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 SSX7Q7RTT5 188 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 DYNAPQ8N1N2 210 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 TCTEX1D1Q8N7M0 179 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RNASE11Q8TAA1 199 aaKnown RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 CD300LFQ8TDQ1 290 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 GALMQ96C23 342 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RSG1Q9BU20 258 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 WDR61Q9GZS3 305 aaKnown RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 OR2D2Q9H210 308 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RPRMQ9NS64 109 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 TIMM9Q9Y5J7 89 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 A0A1W2PPE3 182 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 PMS2P5A8MQ11 134 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 C15orf65H3BRN8 121 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RAMP3O60896 148 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RPL35P42766 123 aaKnown RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 UBE2KP61086 200 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 HBG1P69891 147 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 HBG2P69892 147 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 SERF2P84101 59 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 AARDQ4LEZ3 155 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 AKIRIN2Q53H80 203 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 HCP5Q6MZN7 132 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 FAM53AQ6NSI3 398 aaPredicted RBP3.82□□□□□ -1.8
LINC00550-201ENST00000629293 HEPN1Q6WQI6 88 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 SLC35E3Q7Z769 313 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 CYB561D1Q8N8Q1 229 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 OR4C12Q96R67 309 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 RBKSQ9H477 322 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 VSIRQ9H7M9 311 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 KCNIP1Q9NZI2 227 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 PITPNC1Q9UKF7 332 aa3.82□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF737O75373 536 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 S1PR2O95136 353 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 BCL2P10415 239 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 PRDX2P32119 198 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 AESQ08117 197 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 VWC2Q2TAL6 325 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 SMIM21Q3B7S5 101 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 TMEM41BQ5BJD5 291 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 ZNF329Q86UD4 541 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 CD177Q8N6Q3 437 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 METTL1Q9UBP6 276 aaKnown RBP3.81□□□□□ -1.8
LINC00550-201ENST00000629293 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 ODAMA1E959 279 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 C17orf98A8MV24 154 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 RAB29O14966 203 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 NDUFS6O75380 124 aaKnown RBP3.81□□□□□ -1.8
LINC00550-201ENST00000629293 EIF3GO75821 320 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC00550-201ENST00000629293 MEOX2P50222 304 aa3.81□□□□□ -1.8
LINC00550-201ENST00000629293 RAB2AP61019 212 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms