RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 UBE2E1P51965 193 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 RPL23P62829 140 aaKnown RBP17.58■□□□□ 0.41
PNKP-220ENST00000627232 SSX2Q16385 188 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 TMEM116Q8NCL8 245 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 TRGV9Q99603 122 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 CCL19Q99731 98 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 DNAJC4Q9NNZ3 241 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 DOK5Q9P104 306 aa17.58■□□□□ 0.41
PNKP-220ENST00000627232 PLXNB1O43157 2135 aa17.58■□□□□ 0.4
PNKP-220ENST00000627232 C1orf196B1AJZ1 125 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 CLDN34H7C241 214 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 CNIH1O95406 144 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 C8orf88P0DMB2 117 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 RAB5BP61020 215 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 Q8N6K4 173 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 TMEM37Q8WXS4 190 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 TBX15Q96SF7 602 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 SLC25A33Q9BSK2 321 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 MRPL36Q9P0J6 103 aaKnown RBP17.57■□□□□ 0.4
PNKP-220ENST00000627232 YTHDF2Q9Y5A9 579 aaKnown RBP17.57■□□□□ 0.4
PNKP-220ENST00000627232 BPIFB3P59826 476 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 HES1Q14469 280 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 ADIRFQ15847 76 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 C5orf64Q2M2E5 130 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 DYNAPQ8N1N2 210 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 OR1L6Q8NGR2 347 aa17.57■□□□□ 0.4
PNKP-220ENST00000627232 NAV3Q8IVL0 2385 aa17.56■□□□□ 0.4
PNKP-220ENST00000627232 ELOBQ15370 118 aa17.56■□□□□ 0.4
PNKP-220ENST00000627232 PIMREGQ9BSJ6 248 aa17.56■□□□□ 0.4
PNKP-220ENST00000627232 TNFRSF19Q9NS68 423 aa17.56■□□□□ 0.4
PNKP-220ENST00000627232 NDUFS8O00217 210 aa17.55■□□□□ 0.4
PNKP-220ENST00000627232 COX7A2P2O60397 106 aa17.55■□□□□ 0.4
PNKP-220ENST00000627232 ZNF503Q96F45 646 aa17.55■□□□□ 0.4
PNKP-220ENST00000627232 UHRF2Q96PU4 802 aa17.55■□□□□ 0.4
PNKP-220ENST00000627232 LPAR2Q9HBW0 351 aa17.55■□□□□ 0.4
PNKP-220ENST00000627232 APELAP0DMC3 54 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 CTRB1P17538 263 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 ZNF90Q03938 601 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 FXYD3Q14802 87 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 C10orf113Q5VZT2 155 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 CTRB2Q6GPI1 263 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 FAM168AQ92567 244 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 C11orf52Q96A22 123 aa17.54■□□□□ 0.4
PNKP-220ENST00000627232 OR7C2O60412 319 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 NDUFB4O95168 129 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 IGHV3-48P01763 117 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 C1QL4Q86Z23 238 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 OR4X1Q8NH49 305 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 Q8WTZ3 238 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 WNT10AQ9GZT5 417 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 DMRT1Q9Y5R6 373 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 RELNP78509 3460 aa17.53■□□□□ 0.4
PNKP-220ENST00000627232 ELOA3CA0A087WX78 387 aaPredicted RBP17.52■□□□□ 0.4
PNKP-220ENST00000627232 I3L2K1 104 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 KIAA0141Q14154 515 aaPredicted RBP17.52■□□□□ 0.4
PNKP-220ENST00000627232 C19orf35Q6ZS72 473 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 C10orf105Q8TEF2 133 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 ANAPC16Q96DE5 110 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 FAM167A-AS1Q96KT0 104 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 LRBAP50851 2863 aa17.52■□□□□ 0.4
PNKP-220ENST00000627232 RNF224P0DH78 156 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 CD24P25063 80 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 ZNF343Q6P1L6 599 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 PATE2Q6UY27 113 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 ZNF562Q6V9R5 426 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 SLC25A2Q9BXI2 301 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 BIN3Q9NQY0 253 aa17.52■□□□□ 0.39
PNKP-220ENST00000627232 SCO2A0A1W2PP80 73 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 A0A1W2PRE2 83 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 VWC2LB2RUY7 222 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 TMEM11P17152 192 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 PLP1P60201 277 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 C16orf82Q7Z2V1 217 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 AJUBAQ96IF1 538 aa17.51■□□□□ 0.39
PNKP-220ENST00000627232 FAM106CPP0CH98 169 aa17.5■□□□□ 0.39
PNKP-220ENST00000627232 BRS3P32247 399 aa17.5■□□□□ 0.39
PNKP-220ENST00000627232 FBLN7Q53RD9 439 aa17.5■□□□□ 0.39
PNKP-220ENST00000627232 RUSC1-AS1Q66K80 236 aa17.5■□□□□ 0.39
PNKP-220ENST00000627232 C1RLQ9NZP8 487 aa17.5■□□□□ 0.39
PNKP-220ENST00000627232 NPIPB5A8MRT5 1133 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 CXCL1P09341 107 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 CD99P14209 185 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 PAX8Q06710 450 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 LINC01551Q86U37 167 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 OR5AU1Q8NGC0 362 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 ARPC1AQ92747 370 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 PERPQ96FX8 193 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 BBC3Q96PG8 261 aaPredicted RBP17.49■□□□□ 0.39
PNKP-220ENST00000627232 DERL1Q9BUN8 251 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 ZNF355PQ9NSJ1 428 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 URGCP-MRPS24S4R325 110 aa17.49■□□□□ 0.39
PNKP-220ENST00000627232 PRB1P04280 392 aa17.48■□□□□ 0.39
PNKP-220ENST00000627232 CLEC2AQ6UVW9 174 aa17.48■□□□□ 0.39
PNKP-220ENST00000627232 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
PNKP-220ENST00000627232 LY96Q9Y6Y9 160 aa17.48■□□□□ 0.39
PNKP-220ENST00000627232 DCHS2Q6V1P9 2916 aa17.48■□□□□ 0.39
PNKP-220ENST00000627232 TRBV24-1A0A075B6N3 115 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 TGIF2-C20orf24A0A0A6YYL0 155 aa17.47■□□□□ 0.39
PNKP-220ENST00000627232 NCBP2LA6PVI3 153 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms