RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 Q9H8V8 135 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 ENY2Q9NPA8 101 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TECRQ9NZ01 308 aaKnown RBP9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TRAPPC2LQ9UL33 140 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 GCN1Q92616 2671 aaKnown RBP9.44□□□□□ -0.9
LINC00538-201ENST00000626109 PKDREJQ9NTG1 2253 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 HAX1O00165 279 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SH2D1BO14796 132 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SPRY3O43610 288 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SYNGR2O43760 224 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 PSG2P11465 335 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 CCL20P78556 96 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 Q6ZR03 302 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 TCF24Q7RTU0 167 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 SLC35E3Q7Z769 313 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 STPG3Q8N7X2 389 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 OR4S2Q8NH73 311 aa9.44□□□□□ -0.9
LINC00538-201ENST00000626109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.43□□□□□ -0.9
LINC00538-201ENST00000626109 OXTP01178 125 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 SERF2P84101 59 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 FABP9Q0Z7S8 132 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 C11orf71Q6IPW1 123 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 Q6P435 159 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 CLDND2Q8NHS1 167 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 GRAMD2BQ96HH9 432 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 CCL19Q99731 98 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
LINC00538-201ENST00000626109 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 KCNIP1Q9NZI2 227 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 COL12A1Q99715 3063 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
LINC00538-201ENST00000626109 FAM90A26D6RGX4 464 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 MLNRO43193 412 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 ICAM4Q14773 271 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF497Q6ZNH5 498 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 C5orf24Q7Z6I8 188 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 LINC01561Q8N1V8 128 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 GPHA2Q96T91 129 aa9.43□□□□□ -0.9
LINC00538-201ENST00000626109 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
LINC00538-201ENST00000626109 NXPH3O95157 252 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 OR2H2O95918 312 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 TNFAIP6P98066 277 aaPredicted RBP9.42□□□□□ -0.9
LINC00538-201ENST00000626109 RUNX1Q01196 453 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 PNRC1Q12796 327 aaPredicted RBP9.42□□□□□ -0.9
LINC00538-201ENST00000626109 DUX4L9Q6RFH8 374 aaPredicted RBP9.42□□□□□ -0.9
LINC00538-201ENST00000626109 HEPN1Q6WQI6 88 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 CXXC4Q9H2H0 198 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 KCNS2Q9ULS6 477 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 WIPI2Q9Y4P8 454 aa9.42□□□□□ -0.9
LINC00538-201ENST00000626109 PLCE1Q9P212 2302 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 IGHV2-5P01817 119 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 CD55P08174 381 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
LINC00538-201ENST00000626109 XGP55808 180 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 PKIAP61925 76 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 SELENOTP62341 195 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 ZNF146Q15072 292 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 SCCPDHQ8NBX0 429 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 ABCA4P78363 2273 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 A0A0G2JRQ6 117 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 PSPNO60542 156 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 LEPP41159 167 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
LINC00538-201ENST00000626109 TMEM267Q0VDI3 215 aaPredicted RBP9.41□□□□□ -0.9
LINC00538-201ENST00000626109 MSMO1Q15800 293 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 ZCCHC24Q8N2G6 241 aaKnown RBP9.41□□□□□ -0.9
LINC00538-201ENST00000626109 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
LINC00538-201ENST00000626109 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
LINC00538-201ENST00000626109 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 HAND1O96004 215 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 PGA5P0DJD9 388 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 GLIPR1P48060 266 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 KRTAP10-9P60411 292 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 CCL8P80075 99 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 ITLN1Q8WWA0 313 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
LINC00538-201ENST00000626109 GALMQ96C23 342 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
LINC00538-201ENST00000626109 ROS1P08922 2347 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 TMEM30CPA0ZSE6 113 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 SRRM4A7MD48 611 aaKnown RBP9.39□□□□□ -0.91
LINC00538-201ENST00000626109 H3BP45 60 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 OVOL3O00110 214 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 CATR1Q13166 79 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 C12orf54Q6X4T0 127 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms