RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ACP7Q6ZNF0 438 aa7.48□□□□□ -1.21
VCL-206ENST00000623461 RPP25LQ8N5L8 163 aaKnown RBP7.48□□□□□ -1.21
VCL-206ENST00000623461 LYZL4Q96KX0 146 aa7.48□□□□□ -1.21
VCL-206ENST00000623461 TM4SF5O14894 197 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.212e-6■□□□□ 10.6
VCL-206ENST00000623461 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
VCL-206ENST00000623461 BCL6BQ8N143 479 aaPredicted RBP7.47□□□□□ -1.21
VCL-206ENST00000623461 RPRMLQ8N4K4 120 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 KLF14Q8TD94 323 aaPredicted RBP7.47□□□□□ -1.21
VCL-206ENST00000623461 SIGLEC12Q96PQ1 595 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 A0A087X0K7 114 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 C15orf61A6NNL5 157 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 GFRA1P56159 465 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 C1orf53Q5VUE5 145 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 A0A1W2PRD5 423 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 A0A1W2PRF3 423 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 A0A1W2PRM7 423 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 NPIPB11E5RHQ5 1161 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 H3BTX0 84 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 MOSP00540 346 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 OR9G9P0C7N8 305 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 GUSBP1Q15486 140 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 RPL39P5Q59GN2 51 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 OR9G1Q8NH87 305 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
VCL-206ENST00000623461 CRIM1Q9NZV1 1036 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 QRFPP83859 136 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 RRN3P1Q2M238 152 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 RNFT1Q5M7Z0 435 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 TMEM14EPQ6UXP3 125 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 ZNF497Q6ZNH5 498 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 SLC25A48Q6ZT89 311 aaKnown RBP7.47□□□□□ -1.21
VCL-206ENST00000623461 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 FAM90A1Q86YD7 464 aa7.47□□□□□ -1.21
VCL-206ENST00000623461 hDV102S1A0JD36 115 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 ITLN1Q8WWA0 313 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 IGLC2P0DOY2 106 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 IGLC3P0DOY3 106 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 TRAV24A0A0B4J272 114 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 SLC22A18ASQ8N1D0 253 aa7.46□□□□□ -1.21
VCL-206ENST00000623461 ZNF48Q96MX3 618 aaPredicted RBP7.46□□□□□ -1.21
VCL-206ENST00000623461 CHD3Q12873 2000 aaKnown RBP7.46□□□□□ -1.22
VCL-206ENST00000623461 CADP27708 2225 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 TRAV5A0A0B4J249 113 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 ADAMTSL5Q6ZMM2 481 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 ABCA7Q8IZY2 2146 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 YAE1D1Q9NRH1 226 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 FAM90A27PA6NNH2 459 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 LCN12Q6JVE5 192 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 GGTLC1Q9BX51 225 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 DEPPQ9NTK1 212 aa7.46□□□□□ -1.22
VCL-206ENST00000623461 C5orf67F2Z3F1 127 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 YPEL1O60688 119 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 RHOGP84095 191 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 ORMDL2Q53FV1 153 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 YPEL2Q96QA6 119 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 UPK2O00526 184 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 FAM71F2Q6NXP2 309 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 CRISPLD2Q9H0B8 497 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 REG1AP05451 166 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 ECSCRQ19T08 205 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 CHTOPQ9Y3Y2 248 aaKnown RBP7.45□□□□□ -1.22
VCL-206ENST00000623461 R4GN57 208 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 IGKV3D-11A0A0A0MRZ8 115 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 TCRBV4S1A1TA0A5B7 111 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 FOXI3A8MTJ6 420 aaPredicted RBP7.45□□□□□ -1.22
VCL-206ENST00000623461 TREML4Q6UXN2 200 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 WFDC3Q8IUB2 231 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 LOC105371242A0A075B767 164 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 PPIAL4CA0A0B4J2A2 164 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 HAX1O00165 279 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 PPIAL4GP0DN37 164 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 KIR3DL3Q8N743 410 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 TNFRSF14Q92956 283 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 ATP6V0BQ99437 205 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 FNDC1Q4ZHG4 1894 aaPredicted RBP7.45□□□□□ -1.22
VCL-206ENST00000623461 UBE2L6O14933 153 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 ASIPP42127 132 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 TMEM95Q3KNT9 176 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 JMJD8Q96S16 334 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 DNASE2BQ8WZ79 361 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 ASCL2Q99929 193 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 GP6Q9HCN6 339 aa7.45□□□□□ -1.22
VCL-206ENST00000623461 LHX2P50458 406 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 LOXL3P58215 753 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 TEX43Q6ZNM6 134 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 DMRTA2Q96SC8 542 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 FABP5P3A8MUU1 101 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 F2Z2F3 143 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 H7C1H1 209 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 SMAD7O15105 426 aaKnown RBP7.44□□□□□ -1.22
VCL-206ENST00000623461 SELLP14151 372 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms