RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CCL7P80098 99 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 WIPI1Q5MNZ9 446 aaPredicted RBP6.54□□□□□ -1.36
VPS11-209ENST00000622309 Q6ZS49 121 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ANKRD37Q7Z713 158 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 GCSAMQ8N6F7 178 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 FADS6Q8N9I5 356 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 MMABQ96EY8 250 aaPredicted RBP6.54□□□□□ -1.36
VPS11-209ENST00000622309 C1QTNF5Q9BXJ0 243 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 MED12LQ86YW9 2145 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 A0A0J9YY10 115 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 A0A1B0GX78 115 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 FRG2CA6NGY1 282 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ZG16O60844 167 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 GCSHP23434 173 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ACP1P24666 158 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ZNF611Q8N823 705 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 SYT8Q8NBV8 401 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 FLVCR1-AS1Q8TAF5 88 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 SPTSSAQ969W0 71 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 WDR83OSQ9Y284 106 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ASXL3Q9C0F0 2248 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 A0A1W2PRD5 423 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 A0A1W2PRF3 423 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 A0A1W2PRM7 423 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 P04436 131 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CT45A6P0DMU7 189 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CT45A5P0DMU8 189 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CT45A7P0DMV0 189 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 TCTAP57738 103 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CT45A1Q5HYN5 189 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 LINC01545Q5VT33 79 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 ZNF645Q8N7E2 425 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CT45A3Q8NHU0 189 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 CACNA1HO95180 2353 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1-6A0A0C4DH72 117 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 PMS2P5A8MQ11 134 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 MT-ATP8P03928 68 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 MIC13Q5XKP0 118 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 SLC25A47Q6Q0C1 308 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 ZNF808Q8N4W9 903 aaPredicted RBP6.53□□□□□ -1.36
VPS11-209ENST00000622309 URB1-AS1Q96HZ7 61 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 DLL3Q9NYJ7 618 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 ADAMTS9Q9P2N4 1935 aa6.53□□□□□ -1.36
VPS11-209ENST00000622309 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 A0A1W2PQD3 144 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 hADV38S2A0JD32 116 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 C2CD4DB7Z1M9 353 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 GABRG2P18507 467 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 KIR2DL2P43627 348 aaPredicted RBP6.52□□□□□ -1.37
VPS11-209ENST00000622309 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
VPS11-209ENST00000622309 IGLV3-21P80748 117 aaPredicted RBP6.52□□□□□ -1.37
VPS11-209ENST00000622309 GAGE13Q4V321 117 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 CT83Q5H943 113 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 GDF5OSQ5U4N7 250 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 TEX45Q8NA69 505 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 ALKBH4Q9NXW9 302 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 PTPRZ1P23471 2315 aaPredicted RBP6.52□□□□□ -1.37
VPS11-209ENST00000622309 UNC13CQ8NB66 2214 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 MPDU1O75352 247 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 APOMO95445 188 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 OPRK1P41145 380 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 INSL3P51460 131 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 SPINK9Q5DT21 86 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 NUP35Q8NFH5 326 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 PIGCQ92535 297 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 ZDHHC16Q969W1 377 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 PTH2Q96A98 100 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 PLEKHA3Q9HB20 300 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 SIGLEC8Q9NYZ4 499 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 F11RQ9Y624 299 aaKnown RBP6.52□□□□□ -1.37
VPS11-209ENST00000622309 CPAMD8Q8IZJ3 1885 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 C21orf140B9A014 251 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 H3BMG7 143 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 CLPSP04118 112 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 FGF6P10767 208 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 ZFAND6Q6FIF0 208 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 SLC22A18ASQ8N1D0 253 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 SLC37A2Q8TED4 501 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 FAM168AQ92567 244 aa6.52□□□□□ -1.37
VPS11-209ENST00000622309 TNFSF11O14788 317 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 CATR1Q13166 79 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 KLRD1Q13241 179 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 RBPMS2Q6ZRY4 209 aaKnown RBP6.51□□□□□ -1.37
VPS11-209ENST00000622309 GTSF1Q8WW33 167 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 KLRF1Q9NZS2 232 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 MPC1Q9Y5U8 109 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 FAM186AA6NE01 2351 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 PRTN3P24158 256 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms