RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 NACAE9PAV3 2078 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 TRAV34A0A0B4J273 112 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 IL34Q6ZMJ4 242 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 KMT2BQ9UMN6 2715 aaPredicted RBP8.39□□□□□ -1.07
VPS11-208ENST00000621676 IGHV2-70DA0A0C4DH43 119 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 RNASE2P10153 161 aaKnown RBP8.39□□□□□ -1.07
VPS11-208ENST00000621676 ASB13Q8WXK3 278 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 SLC35E1Q96K37 410 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 MED9Q9NWA0 146 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 USF1P22415 310 aaPredicted RBP8.38□□□□□ -1.07
VPS11-208ENST00000621676 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 GGTLC1Q9BX51 225 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 J3KRW8 73 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 J3QKU1 62 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 NBR2O15453 112 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 FGF16O43320 207 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 SRD5A1P18405 259 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 SUMO1P63165 101 aaKnown RBP8.38□□□□□ -1.07
VPS11-208ENST00000621676 SSX8Q7RTT4 187 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 PDPNQ86YL7 162 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 FAM24BQ8N5W8 94 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 TVP23CQ96ET8 276 aa8.38□□□□□ -1.07
VPS11-208ENST00000621676 RBM14Q96PK6 669 aaKnown RBP8.38□□□□□ -1.07
VPS11-208ENST00000621676 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 MC5RP33032 325 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 CEACAM3P40198 252 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 RPL11P62913 178 aaKnown RBP8.37□□□□□ -1.07
VPS11-208ENST00000621676 TIGITQ495A1 244 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 RASL11BQ9BPW5 248 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
VPS11-208ENST00000621676 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 RAB19A4D1S5 217 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 HAX1O00165 279 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 NPFFO15130 113 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 NDUFB4O95168 129 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 AWAT1Q58HT5 328 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 DUX3Q96PT4 197 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 NDUFA4L2Q9NRX3 87 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 STAB1Q9NY15 2570 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 PDZD2O15018 2839 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 A8MXK9 166 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 GPR183P32249 361 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 C1orf159Q96HA4 380 aa8.37□□□□□ -1.07
VPS11-208ENST00000621676 ATP6V0E1O15342 81 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 MSMBP08118 114 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 TAGLN2P37802 199 aaKnown RBP8.36□□□□□ -1.07
VPS11-208ENST00000621676 KIR2DS2P43631 304 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 RPP30P78346 268 aaKnown RBP8.36□□□□□ -1.07
VPS11-208ENST00000621676 WFDC12Q8WWY7 111 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 GNG5P63218 68 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 TMEM177Q53S58 311 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 MMD2Q8IY49 270 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 VSTM2AQ8TAG5 236 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 COL6A5A8TX70 2615 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 OVOL3O00110 214 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 CYB5BO43169 146 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS11-208ENST00000621676 COX7A2P2O60397 106 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 RAB31Q13636 194 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 ZNF429Q86V71 674 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 SMIM7Q9BQ49 75 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 ACTR3CQ9C0K3 210 aaPredicted RBP8.36□□□□□ -1.07
VPS11-208ENST00000621676 DMRT1Q9Y5R6 373 aa8.36□□□□□ -1.07
VPS11-208ENST00000621676 PF4V1P10720 104 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 PEA15Q15121 130 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 TMEM41BQ5BJD5 291 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 CLEC19AQ6UXS0 136 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 AMMECR1Q9Y4X0 333 aaPredicted RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 C11orf94C9JXX5 98 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 C17orf112F2Z3M2 114 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 GNG7O60262 68 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 ZP3P21754 424 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 FCGR2BP31994 310 aaPredicted RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 RPL15P61313 204 aaKnown RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 OR5I1Q13606 314 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 C5orf64Q2M2E5 130 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 HSD17B13Q7Z5P4 300 aaPredicted RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.35□□□□□ -1.07
VPS11-208ENST00000621676 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 OR5B3Q8NH48 314 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 SIRPDQ9H106 197 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 WDR83OSQ9Y284 106 aa8.35□□□□□ -1.07
VPS11-208ENST00000621676 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 H3BQ15 152 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 FAM106CPP0CH98 169 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms