RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 HRH4Q9H3N8 390 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 F8P00451 2351 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 MFSD2BA6NFX1 497 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 I3L2K1 104 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 K7EIM0 57 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 RAB2AP61019 212 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF329Q86UD4 541 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 NDUFB8O95169 186 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 OR10J1P30954 320 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 FFAR4Q5NUL3 377 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 PXDC1Q5TGL8 231 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 C10orf99Q6UWK7 81 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF709Q8N972 641 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 BPIFCQ8NFQ6 507 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
CBWD3-216ENST00000621396 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 IGHG2P01859 326 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 ATP5IP56385 69 aaPredicted RBP12.46□□□□□ -0.41
CBWD3-216ENST00000621396 AKR1C8PQ5T2L2 129 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
CBWD3-216ENST00000621396 SRSF8Q9BRL6 282 aaKnown RBP12.46□□□□□ -0.41
CBWD3-216ENST00000621396 FN1P02751 2386 aaKnown RBP12.46□□□□□ -0.41
CBWD3-216ENST00000621396 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.42
CBWD3-216ENST00000621396 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.42
CBWD3-216ENST00000621396 CD99P14209 185 aa12.46□□□□□ -0.42
CBWD3-216ENST00000621396 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.42
CBWD3-216ENST00000621396 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.42
CBWD3-216ENST00000621396 CITED4Q96RK1 184 aa12.46□□□□□ -0.42
CBWD3-216ENST00000621396 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 INAFM1C9JVW0 142 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 GPX4P36969 197 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-216ENST00000621396 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 STPG3Q8N7X2 389 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 PXMP4Q9Y6I8 212 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 M0QZK8 103 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
CBWD3-216ENST00000621396 RPP25LQ8N5L8 163 aaKnown RBP12.45□□□□□ -0.42
CBWD3-216ENST00000621396 PRDM13Q9H4Q3 707 aa12.45□□□□□ -0.42
CBWD3-216ENST00000621396 YIF1AO95070 293 aa12.44□□□□□ -0.42
CBWD3-216ENST00000621396 HNF1AP20823 631 aa12.44□□□□□ -0.42
CBWD3-216ENST00000621396 ZNF726P1Q15940 193 aa12.44□□□□□ -0.42
CBWD3-216ENST00000621396 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-216ENST00000621396 PARD6GQ9BYG4 376 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-216ENST00000621396 FBXL7Q9UJT9 491 aa12.44□□□□□ -0.42
CBWD3-216ENST00000621396 IGHV3-35A0A0C4DH35 117 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 FAM181BA6NEQ2 426 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 DNAJC9-AS1A6NH13 148 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 FGF8P55075 233 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-216ENST00000621396 B2MP61769 119 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 RHOGP84095 191 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 SRSF2Q01130 221 aaKnown RBP12.43□□□□□ -0.42
CBWD3-216ENST00000621396 C15orf32Q32M92 178 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-216ENST00000621396 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 SLC25A22Q9H936 323 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 DOK5Q9P104 306 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 TRIM77I1YAP6 450 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 CORTO00230 105 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 SRD5A1P18405 259 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
CBWD3-216ENST00000621396 C17orf112F2Z3M2 114 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
CBWD3-216ENST00000621396 IGF1P05019 195 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 CCL20P78556 96 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 C16orf82Q7Z2V1 217 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-216ENST00000621396 TMEM116Q8NCL8 245 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 OR10G9Q8NGN4 311 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 OR10G7Q8NGN6 311 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 SFT2D1Q8WV19 159 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 OR2T8A6NH00 312 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 SERF2P84101 59 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 FAM122CQ6P4D5 195 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 COMMD7Q86VX2 200 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 SLC45A2Q9UMX9 530 aa12.42□□□□□ -0.42
CBWD3-216ENST00000621396 F8W735 103 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-216ENST00000621396 MPDU1O75352 247 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 LINC00869P0C866 280 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
CBWD3-216ENST00000621396 C19orf54Q5BKX5 351 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 ETFRF1Q6IPR1 90 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 RCC1LQ96I51 464 aaKnown RBP12.41□□□□□ -0.42
CBWD3-216ENST00000621396 SEPSECSQ9HD40 501 aaKnown RBP12.41□□□□□ -0.42
CBWD3-216ENST00000621396 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 AP4M1O00189 453 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 TSPAN15O95858 294 aa12.41□□□□□ -0.42
CBWD3-216ENST00000621396 SRSF3P84103 164 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms