RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OR9G4Q8NGQ1 327 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 FOXA3P55318 350 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-219ENST00000620786 KLHL30-AS1Q8NEE0 82 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 BPESC1Q9GZL8 116 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 SRRM5B3KS81 715 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 M0R1W7 72 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 DNAL4O96015 105 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 ZNF324BQ6AW86 544 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-219ENST00000620786 LRTM2Q8N967 370 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 NEUROG1Q92886 237 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 ASCL2Q99929 193 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 ZNF319Q9P2F9 582 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 SLC17A3O00476 420 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 CLPSP04118 112 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 COL8A2P25067 703 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
CLIP1-219ENST00000620786 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 ZNF506Q5JVG8 444 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 NABP1Q96AH0 204 aa9.42□□□□□ -0.9
CLIP1-219ENST00000620786 SMIM6P0DI80 62 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CKAP5Q14008 2032 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 FABP5P3A8MUU1 101 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CD8AP01732 235 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 NAT1P18440 290 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 TMEM136Q6ZRR5 245 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 Q96MF0 132 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 DICER1Q9UPY3 1922 aaKnown RBP9.41□□□□□ -0.9
CLIP1-219ENST00000620786 APOHP02749 345 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-219ENST00000620786 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 ZNF414Q96IQ9 312 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 TRIOBPQ9H2D6 2365 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 FABP2P12104 132 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CNTFRP26992 372 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CD177Q8N6Q3 437 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 ST20Q9HBF5 79 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
CLIP1-219ENST00000620786 VENTXO95231 258 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 IGHG3P01860 377 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CBLN1P23435 193 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
CLIP1-219ENST00000620786 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 IL36BQ9NZH7 164 aa9.41□□□□□ -0.9
CLIP1-219ENST00000620786 CABIN1Q9Y6J0 2220 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 OVOL1O14753 267 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 LY6HO94772 140 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 Q5BKY6 102 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 RPUSD1Q9UJJ7 312 aaKnown RBP9.4□□□□□ -0.9
CLIP1-219ENST00000620786 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-219ENST00000620786 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.9
CLIP1-219ENST00000620786 GREB1Q4ZG55 1949 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 A0A087WV48 116 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 MPTX1A8MV57 137 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 HOXA5P20719 270 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 Q6AWC8 147 aa9.4□□□□□ -0.9
CLIP1-219ENST00000620786 OR11H12B2RN74 326 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 OR11H1Q8NG94 326 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 OR11H2Q8NH07 326 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 FAM131CQ96AQ9 280 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 GAFA1Q96PS6 74 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 FOXC2Q99958 501 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 COL4A6Q14031 1691 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 A0A1B0GW15 77 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 CXorf65A6NEN9 183 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 TMEM50AO95807 157 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 HEPN1Q6WQI6 88 aa9.4□□□□□ -0.91
CLIP1-219ENST00000620786 DOCK4Q8N1I0 1966 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 PIP4P2Q8N4L2 257 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 TRAV8-6A0A0B4J262 113 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 NDUFS8O00217 210 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 PYYP10082 97 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 ZNF474Q6S9Z5 364 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-219ENST00000620786 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 ATP5LO75964 103 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 LHFPL4Q7Z7J7 247 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 TBL2Q9Y4P3 447 aaKnown RBP9.39□□□□□ -0.91
CLIP1-219ENST00000620786 PRADC1Q9BSG0 188 aa9.39□□□□□ -0.91
CLIP1-219ENST00000620786 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 SOX21Q9Y651 276 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-219ENST00000620786 A0A0A6YYD4 124 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 A6NNC1 897 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 GAS1P54826 345 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 ASCL4Q6XD76 172 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 KIR3DL3Q8N743 410 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-219ENST00000620786 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 PRR32B1ATL7 298 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 E7EQL1 145 aa9.38□□□□□ -0.91
CLIP1-219ENST00000620786 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-219ENST00000620786 RBMY1BA6NDE4 496 aaKnown RBP9.38□□□□□ -0.91
CLIP1-219ENST00000620786 RBMY1EA6NEQ0 496 aaKnown RBP9.38□□□□□ -0.91
CLIP1-219ENST00000620786 BUB1B-PAK6H3BSN5 160 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms