RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RNASEKQ6P5S7 137 aaKnown RBP5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 VKORC1L1Q8N0U8 176 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF738Q8NE65 137 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 GNB4Q9HAV0 340 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 LAMTOR2Q9Y2Q5 125 aa5.76□□□□□ -1.49
SRGAP3-213ENST00000618999 SPTAN1Q13813 2472 aaKnown RBP5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 CACNA1AO00555 2505 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 M0R2Z0 102 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 OR9G9P0C7N8 305 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 PLA2G5P39877 138 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 CAMPP49913 170 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 RTL8BQ17RB0 113 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 TPTE2P1Q5T6R2 138 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 LEMD1Q68G75 181 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 PRR27Q6MZM9 219 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 C19orf35Q6ZS72 473 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 LRRC29Q8WV35 223 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF835Q9Y2P0 537 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 ZZEF1O43149 2961 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 C9JCJ5 164 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 NDUFS8O00217 210 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 RRHO14718 337 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 Q0VG73 95 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 VWC2Q2TAL6 325 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 KIAA2026Q5HYC2 2103 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 FAM162BQ5T6X4 162 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 C1orf174Q8IYL3 243 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 OR5B3Q8NH48 314 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 FAM216AQ8WUB2 273 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 CHRDL1Q9BU40 450 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 TIMM8BQ9Y5J9 83 aaPredicted RBP5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 U3KQE9 123 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 PKD1L2Q7Z442 2459 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 TRGV10A0A0A0MS01 117 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 EFNB3Q15768 340 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 TMEM249Q2WGJ8 235 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 Q56UQ5 140 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 OR10J3Q5JRS4 329 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 OR13A1Q8NGR1 328 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 MGST2Q99735 147 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 PRORYQ9H606 182 aa5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 YTHDF2Q9Y5A9 579 aaKnown RBP5.75□□□□□ -1.49
SRGAP3-213ENST00000618999 DOCK11Q5JSL3 2073 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 PKDREJQ9NTG1 2253 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 LINC00473A8K010 186 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 CIDEAO60543 219 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF324O75467 553 aaPredicted RBP5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 GPX1P07203 203 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 UBE2G1P62253 170 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 UBE2L3P68036 154 aaKnown RBP5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 LY96Q9Y6Y9 160 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 PLCE1Q9P212 2302 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 PMS2P5A8MQ11 134 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 IGLV1-44P01699 117 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 OR10J4P0C629 311 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 MFAP2P55001 183 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 TDRG1Q3Y452 100 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 SMIM15Q7Z3B0 74 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 ST6GALNAC3Q8NDV1 305 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 OR2Z1Q8NG97 314 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 RNASE7Q9H1E1 156 aaKnown RBP5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 CA7P43166 264 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 LINC00205P59089 165 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 ACP7Q6ZNF0 438 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 FAM19A2Q8N3H0 131 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 OR2V2Q96R30 315 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 SAP30LQ9HAJ7 183 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 ARL2-SNX15V9GYD0 113 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 ABCA4P78363 2273 aa5.74□□□□□ -1.49
SRGAP3-213ENST00000618999 FAM90A9PA6NNJ1 464 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 SPRY3O43610 288 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 PRDX2P32119 198 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 DUTP33316 252 aaKnown RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 KLF3P57682 345 aaPredicted RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 ERVK11-1P61568 191 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 HSPE1P61604 102 aaKnown RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 LYG1Q8N1E2 194 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 DAZAP1Q96EP5 407 aaKnown RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 AP1S3Q96PC3 154 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 OSTCQ9NRP0 149 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 JPT1Q9UK76 154 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 CHD3Q12873 2000 aaKnown RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 TRBV20OR9-2A0A075B6H5 130 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 TMEM8BA6NDV4 472 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 IQCF6A8MYZ5 107 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 COX7A2P2O60397 106 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 IGFBP2P18065 325 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 ZNF134P52741 427 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 RPL39P5Q59GN2 51 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 SPATA31B1PQ5VZV4 182 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 FAM53AQ6NSI3 398 aaPredicted RBP5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 MIR17HGQ75NE6 70 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 WDR86Q86TI4 376 aa5.73□□□□□ -1.49
SRGAP3-213ENST00000618999 NHLRC2Q8NBF2 726 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms