RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 NUDT10Q8NFP7 164 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 NUDT11Q96G61 164 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 H3BUT2 72 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 ZNF785A8K8V0 405 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 C21orf140B9A014 251 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 M0QZ24 198 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 CKS2P33552 79 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 RPL27AP46776 148 aaKnown RBP17■□□□□ 0.31
PCSK6-217ENST00000618548 TPTE2P1Q5T6R2 138 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 RPP21Q9H633 154 aaKnown RBP17■□□□□ 0.31
PCSK6-217ENST00000618548 OBSL1O75147 1896 aa17■□□□□ 0.31
PCSK6-217ENST00000618548 CLEC3BP05452 202 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 TMEM116Q8NCL8 245 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 NAA38Q9BRA0 125 aaKnown RBP16.99■□□□□ 0.31
PCSK6-217ENST00000618548 NPPCP23582 126 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 LMO1P25800 156 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 PDLIM4P50479 330 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 GPR82Q96P67 336 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 IGKV3D-15A0A087WSY6 115 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 SAA2-SAA4A0A096LPE2 208 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 CECR9P0C854 216 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 SAA2P0DJI9 122 aaPredicted RBP16.99■□□□□ 0.31
PCSK6-217ENST00000618548 MEGF9Q9H1U4 602 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 PLCE1Q9P212 2302 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 A1L4Q6 167 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 TMEM136Q6ZRR5 245 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 SNRNP40Q96DI7 357 aaKnown RBP16.99■□□□□ 0.31
PCSK6-217ENST00000618548 THYN1Q9P016 225 aa16.99■□□□□ 0.31
PCSK6-217ENST00000618548 INSIG2Q9Y5U4 225 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 THADAQ6YHU6 1953 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 HOXA4Q00056 320 aaPredicted RBP16.98■□□□□ 0.31
PCSK6-217ENST00000618548 LHFPL4Q7Z7J7 247 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 MUC21A0A0G2JKD1 596 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 MUC21A0A140T8X8 626 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 C7orf71A4D174 169 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.98■□□□□ 0.31
PCSK6-217ENST00000618548 YPEL1O60688 119 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 PSG1P11464 419 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 MUC21Q5SSG8 566 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 COQ2Q96H96 371 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 YPEL2Q96QA6 119 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 PILRBQ9UKJ0 227 aa16.98■□□□□ 0.31
PCSK6-217ENST00000618548 GNG7O60262 68 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 TDGF1P13385 188 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 IGHV1-2P23083 117 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 ATP1A1-AS1Q5TC04 95 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 PCDH15Q96QU1 1955 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 IGHV1-69-2A0A0G2JMI3 117 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 MBNL3Q9NUK0 354 aaKnown RBP16.97■□□□□ 0.31
PCSK6-217ENST00000618548 UFC1Q9Y3C8 167 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 OR10W1Q8NGF6 305 aa16.97■□□□□ 0.31
PCSK6-217ENST00000618548 PRB4P10163 310 aaPredicted RBP16.96■□□□□ 0.31
PCSK6-217ENST00000618548 UBALD2Q8IYN6 164 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 OR52E5Q8NH55 327 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 ST20Q9HBF5 79 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 RPL11P62913 178 aaKnown RBP16.96■□□□□ 0.31
PCSK6-217ENST00000618548 TWIST1Q15672 202 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 MLANAQ16655 118 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 ZNF714Q96N38 554 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 PROK2Q9HC23 129 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 LY96Q9Y6Y9 160 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 A0A087X0K7 114 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 TMEM189A5PLL7 270 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 MLNRO43193 412 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 Q6ZT83 130 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 C11orf1Q9H5F2 150 aa16.96■□□□□ 0.31
PCSK6-217ENST00000618548 MRPS18CQ9Y3D5 142 aaKnown RBP16.96■□□□□ 0.31
PCSK6-217ENST00000618548 RIF1Q5UIP0 2472 aaKnown RBP16.96■□□□□ 0.3
PCSK6-217ENST00000618548 RBPMS2Q6ZRY4 209 aaKnown RBP16.96■□□□□ 0.3
PCSK6-217ENST00000618548 WFDC3Q8IUB2 231 aa16.96■□□□□ 0.3
PCSK6-217ENST00000618548 NUP35Q8NFH5 326 aa16.96■□□□□ 0.3
PCSK6-217ENST00000618548 C18orf15Q96N68 181 aa16.96■□□□□ 0.3
PCSK6-217ENST00000618548 RCHY1Q96PM5 261 aa16.96■□□□□ 0.3
PCSK6-217ENST00000618548 NCBP2LA6PVI3 153 aaKnown RBP16.95■□□□□ 0.3
PCSK6-217ENST00000618548 A0A1B0GUT8 65 aa16.95■□□□□ 0.3
PCSK6-217ENST00000618548 MED13LQ71F56 2210 aa16.95■□□□□ 0.3
PCSK6-217ENST00000618548 ATP5IP56385 69 aaPredicted RBP16.95■□□□□ 0.3
PCSK6-217ENST00000618548 OR4C13Q8NGP0 309 aa16.95■□□□□ 0.3
PCSK6-217ENST00000618548 C18orf32Q8TCD1 76 aa16.95■□□□□ 0.3
PCSK6-217ENST00000618548 SCNM1Q9BWG6 230 aa16.95■□□□□ 0.3
PCSK6-217ENST00000618548 MRPS16Q9Y3D3 137 aaKnown RBP16.95■□□□□ 0.3
PCSK6-217ENST00000618548 IL18BPO95998 194 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 SCGB1C2P0DMR2 95 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 ZNF138P52744 262 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 ASPHD1Q5U4P2 390 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 TRAV30A0A087WSZ9 112 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 UPK2O00526 184 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 SAA1P0DJI8 122 aaPredicted RBP16.94■□□□□ 0.3
PCSK6-217ENST00000618548 CD69Q07108 199 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 MAJINQ3KP22 176 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 FAM216BQ8N7L0 139 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 KBTBD11-OT1A0A1B0GTJ5 212 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 CDX2Q99626 313 aaPredicted RBP16.94■□□□□ 0.3
PCSK6-217ENST00000618548 SPCS1Q9Y6A9 102 aa16.94■□□□□ 0.3
PCSK6-217ENST00000618548 SH2D7A6NKC9 451 aaPredicted RBP16.93■□□□□ 0.3
PCSK6-217ENST00000618548 CACNG8Q8WXS5 425 aa16.93■□□□□ 0.3
PCSK6-217ENST00000618548 EPDR1Q9UM22 224 aa16.93■□□□□ 0.3
PCSK6-217ENST00000618548 CIDEAO60543 219 aa16.93■□□□□ 0.3
PCSK6-217ENST00000618548 S100A4P26447 101 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms