RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 NPBWR1P48145 328 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 DAD1P61803 113 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 PRCDQ00LT1 54 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 BSXQ3C1V8 233 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 Q6ZSA8 131 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 CCDC197Q8NCU1 140 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 OR1S2Q8NGQ3 325 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 SCRT1Q9BWW7 348 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 KRTAP1-5Q9BYS1 174 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 Q9H8V8 135 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 SCPEP1Q9HB40 452 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 LSM2Q9Y333 95 aaKnown RBP3.17□□□□□ -1.9
SNCA-213ENST00000618500 UBR4Q5T4S7 5183 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 TRAV1-2A0A0B4J238 106 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 KNCNA6PVL3 124 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 RAB27BO00194 218 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 SOCS3O14543 225 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 TMEM127O75204 238 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 ARL6IP5O75915 188 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 TMEM50AO95807 157 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 HNRNPCP07910 306 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNCA-213ENST00000618500 OR13C7P0DN81 318 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 YPEL3P61236 119 aaPredicted RBP3.16□□□□□ -1.9
SNCA-213ENST00000618500 ERVK-16P61578 105 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 OR10K2Q6IF99 312 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 SLC25A24Q6NUK1 477 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 LGALS14Q8TCE9 139 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 FAM3DQ96BQ1 224 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 ANAPC10Q9UM13 185 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 OR51B2Q9Y5P1 312 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 IGKV1D-13A0A0B4J2D9 117 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 LOC102723971A0A1B0GUV8 181 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 FAM90A26D6RGX4 464 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 IGKV1-13P0DP09 117 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 AARDQ4LEZ3 155 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 ACTL10Q5JWF8 245 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 HACD4Q5VWC8 232 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 AMIGO2Q86SJ2 522 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 C10orf67Q8IYJ2 551 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 SPAG16Q8N0X2 631 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 TMEM256Q8N2U0 113 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 OR10J6PQ8NGY7 276 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 IGF2BP2-AS1Q96M15 143 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 C20orf144Q9BQM9 153 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 MND1Q9BWT6 205 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 HRASLSQ9HDD0 168 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 RBM7Q9Y580 266 aaKnown RBP3.16□□□□□ -1.9
SNCA-213ENST00000618500 SELENOKQ9Y6D0 94 aa3.16□□□□□ -1.9
SNCA-213ENST00000618500 A0A0A6YYH2 397 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 A6NJ64 397 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 PDCD5O14737 125 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 GNG7O60262 68 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 CLN5O75503 358 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 ATP5HO75947 161 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 IFNA5P01569 189 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 APOHP02749 345 aaPredicted RBP3.15□□□□□ -1.9
SNCA-213ENST00000618500 ATP5G1P05496 136 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 H2AFB1P0C5Y9 115 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 H2AFB2P0C5Z0 115 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 GCSHP23434 173 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 TALDO1P37837 337 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 ATP5G3P48201 142 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.9
SNCA-213ENST00000618500 PLA2G7Q13093 441 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 DHRS2Q13268 280 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 TBCEQ15813 527 aaPredicted RBP3.15□□□□□ -1.9
SNCA-213ENST00000618500 C1orf194Q5T5A4 169 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 OR8G2PQ6IF36 304 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 C1orf158Q8N1D5 194 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 RXFP4Q8TDU9 374 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 MISP3Q96FF7 219 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 NRN1Q9NPD7 142 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 CLEC2DQ9UHP7 191 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 PSORS1C1Q9UIG5 152 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 ANXA10Q9UJ72 324 aa3.15□□□□□ -1.9
SNCA-213ENST00000618500 PLAC8L1A1L4L8 177 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 ZNF207O43670 478 aaKnown RBP3.15□□□□□ -1.91
SNCA-213ENST00000618500 ADAP1O75689 374 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 MT-CO2P00403 227 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 TFPI2P48307 235 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 PSG9Q00887 426 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 C2orf76Q3KRA6 126 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 PACRGLQ8N7B6 248 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 OR10W1Q8NGF6 305 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 C16orf92Q96LL3 132 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 ARPC5LQ9BPX5 153 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 CCDC90BQ9GZT6 254 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 KCNK15Q9H427 330 aa3.15□□□□□ -1.91
SNCA-213ENST00000618500 YTHDF2Q9Y5A9 579 aaKnown RBP3.15□□□□□ -1.91
SNCA-213ENST00000618500 IGKV1D-8A0A087WSZ0 117 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 A0A087WTM6 91 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 TRAV3A0A0B4J244 114 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 A0A1B0GU03 582 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 METTL21EPA6NDL7 271 aa3.14□□□□□ -1.91
SNCA-213ENST00000618500 MARCH11A6NNE9 402 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms