RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 JUNBP17275 347 aaPredicted RBP8.91□□□□□ -0.98
POLR2A-209ENST00000617998 DUX4L9Q6RFH8 374 aaPredicted RBP8.91□□□□□ -0.98
POLR2A-209ENST00000617998 ZNF497Q6ZNH5 498 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 MYO18BQ8IUG5 2567 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 GPR146Q96CH1 333 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 SIGLEC9Q9Y336 463 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 C11orf94C9JXX5 98 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 FAM90A26D6RGX4 464 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 FGF16O43320 207 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 CD55P08174 381 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 SGK494Q96LW2 274 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
POLR2A-209ENST00000617998 MED12Q93074 2177 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 NUP210Q8TEM1 1887 aaPredicted RBP8.9□□□□□ -0.98
POLR2A-209ENST00000617998 EVI2AP22794 236 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 PQLC2Q6ZP29 291 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 ZNF818PQ6ZRF7 136 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 ALKBH7Q9BT30 221 aaPredicted RBP8.9□□□□□ -0.98
POLR2A-209ENST00000617998 TRBV5-5A0A0J9YX44 114 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 TEX48A0A1B0GUV7 120 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 KLF17Q5JT82 389 aaPredicted RBP8.9□□□□□ -0.98
POLR2A-209ENST00000617998 BET1LQ9NYM9 111 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 GZMMP51124 257 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 C1orf100Q5SVJ3 147 aa8.9□□□□□ -0.98
POLR2A-209ENST00000617998 SMIM18P0DKX4 95 aa8.9□□□□□ -0.99
POLR2A-209ENST00000617998 ELOBQ15370 118 aa8.9□□□□□ -0.99
POLR2A-209ENST00000617998 EIF3GO75821 320 aaKnown RBP eCLIP8.9□□□□□ -0.99
POLR2A-209ENST00000617998 OR5AL1P0C617 328 aa8.9□□□□□ -0.99
POLR2A-209ENST00000617998 SRIP30626 198 aa8.9□□□□□ -0.99
POLR2A-209ENST00000617998 HOXD3P31249 432 aaPredicted RBP8.9□□□□□ -0.99
POLR2A-209ENST00000617998 TAF15Q92804 592 aaKnown RBP eCLIP8.9□□□□□ -0.99
POLR2A-209ENST00000617998 COL4A4P53420 1690 aaPredicted RBP8.89□□□□□ -0.99
POLR2A-209ENST00000617998 MBPP02686 304 aaPredicted RBP8.89□□□□□ -0.99
POLR2A-209ENST00000617998 LINC00114Q6XXX2 140 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 NDUFA11Q86Y39 141 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 ZNF383Q8NA42 475 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 RCC1LQ96I51 464 aaKnown RBP8.89□□□□□ -0.99
POLR2A-209ENST00000617998 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 GTF3C1Q12789 2109 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 BAP18Q8IXM2 172 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 MRPL32Q9BYC8 188 aaKnown RBP8.89□□□□□ -0.99
POLR2A-209ENST00000617998 IGKV1D-17A0A075B6S4 117 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 TGOLN2O43493 480 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 INSL3P51460 131 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 PRR31Q5SQ13 230 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 NAT8BQ9UHF3 227 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 MMP9P14780 707 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 TCL1AP56279 114 aa8.89□□□□□ -0.99
POLR2A-209ENST00000617998 G3V318 75 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 HSBP1O75506 76 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 IGLL5B9A064 214 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 IGLV1-44P01699 117 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 IGHV2-70P01814 119 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
POLR2A-209ENST00000617998 MDKP21741 143 aaPredicted RBP8.88□□□□□ -0.99
POLR2A-209ENST00000617998 TREML4Q6UXN2 200 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 ASB13Q8WXK3 278 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 SPRY4Q9C004 299 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 DOCK4Q8N1I0 1966 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 GUK1Q16774 197 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 C2orf83Q53S99 150 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 FAM71F2Q6NXP2 309 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 CACNG8Q8WXS5 425 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
POLR2A-209ENST00000617998 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 H1FOOQ8IZA3 346 aaPredicted RBP8.88□□□□□ -0.99
POLR2A-209ENST00000617998 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 CCDC168Q8NDH2 2452 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 CRLF1O75462 422 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 SRSF2Q01130 221 aaKnown RBP8.88□□□□□ -0.99
POLR2A-209ENST00000617998 CFHR3Q02985 330 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 GATAD1Q8WUU5 269 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 DCAF16Q9NXF7 216 aa8.88□□□□□ -0.99
POLR2A-209ENST00000617998 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 TMEM256Q8N2U0 113 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 PSG1P11464 419 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 UCP1P25874 307 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 DLK1P80370 383 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 NHLH2Q02577 135 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 FANCMQ8IYD8 2048 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
POLR2A-209ENST00000617998 BTF3P20290 206 aaKnown RBP8.87□□□□□ -0.99
POLR2A-209ENST00000617998 EWSR1Q01844 656 aaKnown RBP eCLIP8.87□□□□□ -0.99
POLR2A-209ENST00000617998 FOXE3Q13461 319 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 SELENOHQ8IZQ5 122 aaKnown RBP8.87□□□□□ -0.99
POLR2A-209ENST00000617998 TMEM204Q9BSN7 226 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 RPLP1P05386 114 aaKnown RBP8.87□□□□□ -0.99
POLR2A-209ENST00000617998 M6PRP20645 277 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 SHISA3A0PJX4 238 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 ANKRD20A5PA0PJZ0 165 aa8.87□□□□□ -0.99
POLR2A-209ENST00000617998 SCGB1C2P0DMR2 95 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms