RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OR1P1Q8NH06 330 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 FAM168AQ92567 244 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 SLC25A33Q9BSK2 321 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 SDF2L1Q9HCN8 221 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 FUT9Q9Y231 359 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 F11RQ9Y624 299 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 ZNF90Q03938 601 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 OR2T10Q8NGZ9 312 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 HIST1H2BAQ96A08 127 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 PARLQ9H300 379 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 DMRT1Q9Y5R6 373 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 UTP20O75691 2785 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 ZNF462Q96JM2 2506 aa13.81□□□□□ -0.2
PCDHGC3-205ENST00000617641 OR2C1O95371 312 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 NPPCP23582 126 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 THAP8Q8NA92 274 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 OR51G1Q8NGK1 321 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 PIMREGQ9BSJ6 248 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 OOSP1A8MZH6 123 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 CRYGCP07315 174 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 UBE2E1P51965 193 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 FAM24BQ8N5W8 94 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 NANPQ8TBE9 248 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 TMEM37Q8WXS4 190 aa13.8□□□□□ -0.2
PCDHGC3-205ENST00000617641 A0A087WWC5 75 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 IGHV4-61A0A0C4DH41 118 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 CRYBA1P05813 215 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 OR5G3P0C626 314 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 ATP5J2P56134 94 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 SSTP61278 116 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 C5orf64Q2M2E5 130 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 ETFRF1Q6IPR1 90 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 YTHDF2Q9Y5A9 579 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 VPS13CQ709C8 3753 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 NDUFS6O75380 124 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 MT-CO2P00403 227 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 C10orf105Q8TEF2 133 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 DOK5Q9P104 306 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 NAT8Q9UHE5 227 aa13.79□□□□□ -0.2
PCDHGC3-205ENST00000617641 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 FXYD3Q14802 87 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 TMEM241Q24JQ0 296 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 TBL2Q9Y4P3 447 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 PDE6DO43924 150 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 SAA4P35542 130 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 Q8N6K4 173 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 NRGNQ92686 78 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 C19orf24Q9BVV8 132 aa13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 TECRQ9NZ01 308 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-205ENST00000617641 CRYBG3Q68DQ2 2970 aa13.77□□□□□ -0.2
PCDHGC3-205ENST00000617641 B4DEV8 164 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 CORTO00230 105 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 MT-ND4LP03901 98 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 SRSF1Q07955 248 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 ADIRFQ15847 76 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 MORN5Q5VZ52 161 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 C12orf57Q99622 126 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 WNT10AQ9GZT5 417 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 ABCA2Q9BZC7 2435 aa13.77□□□□□ -0.21
PCDHGC3-205ENST00000617641 TMEM11P17152 192 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 CLEC2AQ6UVW9 174 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 MALSU1Q96EH3 234 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 PERPQ96FX8 193 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 SRSF8Q9BRL6 282 aaKnown RBP13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 DNAJC4Q9NNZ3 241 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 TNFRSF19Q9NS68 423 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 MLXQ9UH92 298 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 POLR3KQ9Y2Y1 108 aaPredicted RBP13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 COX7A2P2O60397 106 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR7C2O60412 319 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 CLN5O75503 358 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 EBI3Q14213 229 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 FAM120AOSQ5T036 256 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 TMEM116Q8NCL8 245 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 OR4X1Q8NH49 305 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 C22orf15Q8WYQ4 148 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 DERL1Q9BUN8 251 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 CSMD1Q96PZ7 3565 aa13.76□□□□□ -0.21
PCDHGC3-205ENST00000617641 IGHV4-30-2A0A087WSY4 118 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 TRAV5A0A0B4J249 113 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 NDUFB4O95168 129 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 SELENOTP62341 195 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 SCO2A0A1W2PP80 73 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 F6UZH7 168 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 C8orf88P0DMB2 117 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 TAS2R45P59539 299 aa13.75□□□□□ -0.21
PCDHGC3-205ENST00000617641 RPL23P62829 140 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms