RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 RBMY1CP0DJD4 496 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 PGAM2P15259 253 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 ELK1P19419 428 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 CRYBB3P26998 211 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 AKR1C2P52895 323 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 PIGPP57054 158 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 RBMY1FQ15415 496 aaKnown RBP18.1■□□□□ 0.49
PTPRF-216ENST00000617451 TMEM41BQ5BJD5 291 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 LHFPL1Q86WI0 220 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 GRAMD2BQ96HH9 432 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 METTL26Q96S19 204 aa18.1■□□□□ 0.49
PTPRF-216ENST00000617451 FNDC4Q9H6D8 234 aaPredicted RBP18.1■□□□□ 0.49
PTPRF-216ENST00000617451 IGHV4-28A0A0C4DH34 117 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 CLN5O75503 358 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 ETV6P41212 452 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 MLANAQ16655 118 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 MORN3Q6PF18 240 aaPredicted RBP18.09■□□□□ 0.49
PTPRF-216ENST00000617451 STXBP6Q8NFX7 210 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 OR4X1Q8NH49 305 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 VCX3AQ9NNX9 186 aa18.09■□□□□ 0.49
PTPRF-216ENST00000617451 ATG12O94817 140 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 SPP1P10451 314 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 RPL5P46777 297 aaKnown RBP18.08■□□□□ 0.48
PTPRF-216ENST00000617451 P2RY1P47900 373 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 PPP5CP53041 499 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 PDCD10Q9BUL8 212 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 FAT2Q9NYQ8 4349 aa18.08■□□□□ 0.48
PTPRF-216ENST00000617451 A0A087WXM4 84 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 ZNF705EA8MWA4 302 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-216ENST00000617451 HPGDSO60760 199 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 MIFP14174 115 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 HLA-DMBP28068 263 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 OPRK1P41145 380 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 HOXA1P49639 335 aaPredicted RBP18.07■□□□□ 0.48
PTPRF-216ENST00000617451 NCS1P62166 190 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 DCANP1Q8TF63 244 aa18.07■□□□□ 0.48
PTPRF-216ENST00000617451 C3orf85A0A1B0GTC6 90 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 KNCNA6PVL3 124 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 IGKV1-17P01599 117 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 ZNF688P0C7X2 276 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 C4BPBP20851 252 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 BSXQ3C1V8 233 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 RNASE10Q5GAN6 216 aaKnown RBP18.06■□□□□ 0.48
PTPRF-216ENST00000617451 ARRDC1Q8N5I2 433 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 TMEM230Q96A57 120 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 KLK11Q9UBX7 282 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 X6R8D5 127 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 DNAH2Q9P225 4427 aa18.06■□□□□ 0.48
PTPRF-216ENST00000617451 SP6Q3SY56 376 aa18.05■□□□□ 0.48
PTPRF-216ENST00000617451 ENY2Q9NPA8 101 aa18.05■□□□□ 0.48
PTPRF-216ENST00000617451 A0A0G2JRQ6 117 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 SCGB2A1O75556 95 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 CD3DP04234 171 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 VBP1P61758 197 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 TRIM16LQ309B1 348 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 RNASE12Q5GAN4 147 aaKnown RBP18.04■□□□□ 0.48
PTPRF-216ENST00000617451 Q6ZTC4 211 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 CSNK1G2-AS1Q8NCQ2 148 aa18.04■□□□□ 0.48
PTPRF-216ENST00000617451 RRNAD1Q96FB5 475 aaKnown RBP18.04■□□□□ 0.48
PTPRF-216ENST00000617451 NARS2Q96I59 477 aaKnown RBP18.04■□□□□ 0.48
PTPRF-216ENST00000617451 PKHD1P08F94 4074 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 ELOA3CA0A087WX78 387 aaPredicted RBP18.03■□□□□ 0.48
PTPRF-216ENST00000617451 TRAV10A0A0B4J240 114 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 UCP1P25874 307 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 TIGITQ495A1 244 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 ACTL10Q5JWF8 245 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 FUNDC2Q9BWH2 189 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 COPZ2Q9P299 210 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 U3KQE9 123 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 DNAH17Q9UFH2 4485 aa18.03■□□□□ 0.48
PTPRF-216ENST00000617451 TRAV30A0A087WSZ9 112 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 TBPP20226 339 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 AARDQ4LEZ3 155 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 Q6ZRM9 215 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 OR52I2Q8NH67 350 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 ZFAND1Q8TCF1 268 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 MTFP1Q9UDX5 166 aa18.02■□□□□ 0.48
PTPRF-216ENST00000617451 IGHV4-4A0A075B6R2 117 aa18.01■□□□□ 0.47
PTPRF-216ENST00000617451 CCDC71LQ8N9Z2 235 aa18.01■□□□□ 0.47
PTPRF-216ENST00000617451 TERB2Q8NHR7 220 aa18.01■□□□□ 0.47
PTPRF-216ENST00000617451 CLEC5AQ9NY25 188 aa18.01■□□□□ 0.47
PTPRF-216ENST00000617451 TBC1D24Q9ULP9 559 aa18.01■□□□□ 0.47
PTPRF-216ENST00000617451 FAM25AB3EWG3 89 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 FAM25CB3EWG5 89 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 FAM25GB3EWG6 89 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 TNFAIP8O95379 198 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 EIF2B2P49770 351 aaKnown RBP18■□□□□ 0.47
PTPRF-216ENST00000617451 RORCP51449 518 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 SPCS3P61009 180 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 CENPSQ8N2Z9 138 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 OR4D10Q8NGI6 311 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 OR13C8Q8NGS7 320 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 RNASE11Q8TAA1 199 aaKnown RBP18■□□□□ 0.47
PTPRF-216ENST00000617451 RAB40CQ96S21 281 aa18■□□□□ 0.47
PTPRF-216ENST00000617451 RPS10-NUDT3A0A1W2PQS6 291 aa17.99■□□□□ 0.47
PTPRF-216ENST00000617451 HELTA6NFD8 242 aa17.99■□□□□ 0.47
PTPRF-216ENST00000617451 B3GALNT1O75752 331 aa17.99■□□□□ 0.47
PTPRF-216ENST00000617451 IGLC1P0CG04 106 aa17.99■□□□□ 0.47
PTPRF-216ENST00000617451 HTR2BP41595 481 aa17.99■□□□□ 0.47
PTPRF-216ENST00000617451 DHRS2Q13268 280 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms