RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 CMSS1Q9BQ75 279 aaKnown RBP-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 NIPSNAP3BQ9BS92 247 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 AP1M1Q9BXS5 423 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 ANKRD2Q9GZV1 360 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 REEP4Q9H6H4 257 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 ZWILCHQ9H900 591 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 MRM3Q9HC36 420 aaKnown RBP-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 GDE1Q9NZC3 331 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 N6AMT1Q9Y5N5 214 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 ZNF706Q9Y5V0 76 aaPredicted RBP-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 DOCK2Q92608 1830 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 CLIP1P30622 1438 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 DIP2CQ9Y2E4 1556 aa-1.69□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARHGEF12Q9NZN5 1544 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PIK3C2AO00443 1686 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TRBV10-1A0A0K0K1A3 114 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 HEATR9A2RTY3 570 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 LINC00862A6NCI5 91 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 GOLGA6CA6NDK9 693 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 A6NDN8 102 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 C9JCJ5 164 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 ANKRD65E5RJM6 399 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 H3BQV1 296 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 K7EQS6 105 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MYL12BO14950 172 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARPC5O15511 151 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MFSD11O43934 449 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TPPPO94811 219 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NSA2O95478 260 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 IL33O95760 270 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MBD3O95983 291 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TCRBP04435 133 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MGPP08493 103 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 FBP1P09467 338 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 IFIT1P09914 478 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TFPTP0C1Z6 253 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 FGF6P10767 208 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 ANXA3P12429 323 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NCK1P16333 377 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 HLA-DPA1P20036 260 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PMCHP20382 165 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MYL9P24844 172 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PFN2P35080 140 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PPP1CCP36873 323 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SRP14P37108 136 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 BDKRB1P46663 353 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MRPL19P49406 292 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 RGS4P49798 205 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SULT1A1P50225 295 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SSBP1Q04837 148 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 ICA1Q05084 483 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 OR2F1Q13607 317 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 IDI1Q13907 227 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NEDD8Q15843 81 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TRIM16LQ309B1 348 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 C2orf27AQ580R0 203 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 C12orf60Q5U649 245 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 KDELC1Q6UW63 502 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TMEM182Q6ZP80 229 aaPredicted RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 RUFY3Q7L099 469 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 ANKRD37Q7Z713 158 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PRNTQ86SH4 94 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 VPS36Q86VN1 386 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 CREBRFQ8IUR6 639 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 BCORP1Q8N888 145 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 EIF1ADQ8N9N8 165 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MLKLQ8NB16 471 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NUP35Q8NFH5 326 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TSEN15Q8WW01 171 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 H1FXQ92522 213 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NINJ1Q92982 152 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TMEM230Q96A57 120 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SPATA33Q96N06 139 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 FAM210AQ96ND0 272 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 BPIFA3Q9BQP9 254 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 WFDC6Q9BQY6 131 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TTTY13Q9BZ97 58 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 RBKSQ9H477 322 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 CXorf21Q9HAI6 301 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 VAT1LQ9HCJ6 419 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 RIC8AQ9NPQ8 531 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SLC35C2Q9NQQ7 365 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SDHAF3Q9NRP4 125 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MRPL17Q9NRX2 175 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 RAB20Q9NX57 234 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 MRPL36Q9P0J6 103 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PARP4Q9UKK3 1724 aaKnown RBP-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NUDCQ9Y266 331 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PIGLQ9Y2B2 252 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 SLC35A3Q9Y2D2 325 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 TIMM22Q9Y584 194 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 PEX16Q9Y5Y5 336 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 NCOA2Q15596 1464 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 CDHR2Q9BYE9 1310 aa-1.7□□□□□ -2.68
SOX2-OT-236ENST00000616401 WIZO95785 1651 aa-1.71□□□□□ -2.68
SOX2-OT-236ENST00000616401 KIF1AQ12756 1690 aa-1.71□□□□□ -2.68
SOX2-OT-236ENST00000616401 CUL7Q14999 1698 aa-1.71□□□□□ -2.68
SOX2-OT-236ENST00000616401 GOLGB1Q14789 3259 aaKnown RBP-1.71□□□□□ -2.68
SOX2-OT-236ENST00000616401 ARHGEF11O15085 1522 aa-1.71□□□□□ -2.68
SOX2-OT-236ENST00000616401 TOPBP1Q92547 1522 aa-1.71□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms