RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ASPHD1Q5U4P2 390 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 TMEM167AQ8TBQ9 72 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 KIAA1456Q9P272 454 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 SORL1Q92673 2214 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 IFNA10P01566 189 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR8U8P0C7N1 319 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 RPL8P62917 257 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 ALKAL2Q6UX46 152 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 MMD2Q8IY49 270 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 PUSL1Q8N0Z8 303 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR5C1Q8NGR4 320 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 RNF141Q8WVD5 230 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 ATP5SQ99766 215 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 SMIM3Q9BZL3 60 aa13.56□□□□□ -0.24
TRAPPC3-209ENST00000616395 IGSF23A1L1A6 192 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 SAP30O75446 220 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 IGHV4-30-4P0DP06 118 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 PAX9P55771 341 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 ERHP84090 104 aaKnown RBP13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 NHLH2Q02577 135 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR1N2Q8NGR9 330 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 EAF1Q96JC9 268 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 RYR1P21817 5038 aa13.55□□□□□ -0.24
TRAPPC3-209ENST00000616395 H3BP45 60 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 CST7O76096 145 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 SNCAP37840 140 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 SUB1P53999 127 aaKnown RBP eCLIP13.54□□□□□ -0.249e-8■■□□□ 11.8
TRAPPC3-209ENST00000616395 PLGLAQ15195 96 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 RPL7L1Q6DKI1 246 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR2T10Q8NGZ9 312 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 PFDN2Q9UHV9 154 aa13.54□□□□□ -0.24
TRAPPC3-209ENST00000616395 OVOL1O14753 267 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 MOSP00540 346 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 IGHG4P01861 327 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 SEC11BP0C7V7 166 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 RAB5CP51148 216 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 PRCDQ00LT1 54 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 CFHR3Q02985 330 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 ZNF616Q08AN1 781 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 CLINT1Q14677 625 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 Q8N6K4 173 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 C19orf73Q9NVV2 129 aa13.53□□□□□ -0.24
TRAPPC3-209ENST00000616395 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 METTL15P1P0C7V9 234 aa13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 GGACTQ9BVM4 153 aa13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 GNB4Q9HAV0 340 aa13.52□□□□□ -0.25
TRAPPC3-209ENST00000616395 NCBP2LA6PVI3 153 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 SLC25A17O43808 307 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 SOX15O60248 233 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 TMEM50AO95807 157 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 IFNA4P05014 189 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 PSMB8P28062 276 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 BLOC1S1P78537 153 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 EBI3Q14213 229 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 OR8G2PQ6IF36 304 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 Q8N1Y9 231 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 OR5B12Q96R08 314 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 METTL1Q9UBP6 276 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-209ENST00000616395 TRAV3A0A0B4J244 114 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 TEX50A0A1B0GTY4 177 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 SRRM4A7MD48 611 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 I3L521 148 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 NPY1RP25929 384 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 GNB1P62873 340 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 ZNF709Q8N972 641 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 IL17DQ8TAD2 202 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 RITA1Q96K30 269 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
TRAPPC3-209ENST00000616395 A8MZ25 164 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 C17orf112F2Z3M2 114 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 NBR2O15453 112 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 CNTFRP26992 372 aa13.49□□□□□ -0.25
TRAPPC3-209ENST00000616395 PSG5Q15238 335 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms