RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PILRBQ9UKJ0 227 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
MSH6-214ENST00000616033 TRGV10A0A0A0MS01 117 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 ZNF146Q15072 292 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 TMEM116Q8NCL8 245 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 ZBTB34Q8NCN2 500 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 OR2Z1Q8NG97 314 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
MSH6-214ENST00000616033 SPACA3Q8IXA5 215 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 OR10W1Q8NGF6 305 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 OR8B3Q8NGG8 313 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 C1orf159Q96HA4 380 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 TRAV9-2A0A087WT02 112 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 MPDU1O75352 247 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 TRIP6Q15654 476 aaKnown RBP10.81□□□□□ -0.68
MSH6-214ENST00000616033 SLC35E4Q6ICL7 350 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 CT55Q8WUE5 264 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 TMEM45BQ96B21 275 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 ARRDC1-AS1Q9H2J1 176 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 HIGD1CA8MV81 97 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 MT-ND6P03923 174 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 TMEM105Q8N8V8 129 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 TACC2O95359 2948 aa10.81□□□□□ -0.68
MSH6-214ENST00000616033 ERVK11-1P61568 191 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 OR10J3Q5JRS4 329 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
MSH6-214ENST00000616033 C1orf210Q8IVY1 113 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 TOMM40O96008 361 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 ESDP10768 282 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 REG1BP48304 166 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 J3QR06 171 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 VDAC2P45880 294 aaPredicted RBP10.8□□□□□ -0.68
MSH6-214ENST00000616033 ACP7Q6ZNF0 438 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 NUP35Q8NFH5 326 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 SNRNP40Q96DI7 357 aaKnown RBP10.8□□□□□ -0.68
MSH6-214ENST00000616033 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
MSH6-214ENST00000616033 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 SPAARA0A1B0GVQ0 90 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 H3BUT2 72 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 FAM214BQ7L5A3 538 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 FAM173AQ9BQD7 235 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 TNFRSF19Q9NS68 423 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 KALRNO60229 2985 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 ATMQ13315 3056 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 IGKV1OR2-108A0A075B7D4 117 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.79□□□□□ -0.68
MSH6-214ENST00000616033 TAX1BP3O14907 124 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 MMP23AO75900 390 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 PRDX2P32119 198 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 PLP1P60201 277 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 ZNF788Q6ZQV5 615 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 C19orf35Q6ZS72 473 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 UBALD2Q8IYN6 164 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 CD177Q8N6Q3 437 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
MSH6-214ENST00000616033 ISLRO14498 428 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 AZU1P20160 251 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 ATP1A1-AS1Q5TC04 95 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 WDR82Q6UXN9 313 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 AMMECR1Q9Y4X0 333 aaPredicted RBP10.78□□□□□ -0.68
MSH6-214ENST00000616033 OR51B2Q9Y5P1 312 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 TNRC6AQ8NDV7 1962 aaKnown RBP10.78□□□□□ -0.68
MSH6-214ENST00000616033 C9JCJ5 164 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 ORM2P19652 201 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 SCGB2A2Q13296 93 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 MORN2Q502X0 79 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 VWA1Q6PCB0 445 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
MSH6-214ENST00000616033 TXNDC17Q9BRA2 123 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 LINC00470Q9BZP3 86 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
MSH6-214ENST00000616033 ADAMTS20P59510 1910 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 TRBV9A0A0B4J1U6 114 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 IGHV1-69-2A0A0G2JMI3 117 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 IGLC7A0M8Q6 106 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 REG1AP05451 166 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 FXYD7P58549 80 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 DUX4L9Q6RFH8 374 aaPredicted RBP10.78□□□□□ -0.68
MSH6-214ENST00000616033 ZNF503Q96F45 646 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 TMEM167BQ9NRX6 74 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 LAMA5O15230 3695 aa10.78□□□□□ -0.68
MSH6-214ENST00000616033 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.68
MSH6-214ENST00000616033 LINC00869P0C866 280 aa10.77□□□□□ -0.68
MSH6-214ENST00000616033 MEOX1P50221 254 aa10.77□□□□□ -0.68
MSH6-214ENST00000616033 SSBP2P81877 361 aaPredicted RBP10.77□□□□□ -0.68
MSH6-214ENST00000616033 MEF2CQ06413 473 aaPredicted RBP10.77□□□□□ -0.68
MSH6-214ENST00000616033 PERPQ96FX8 193 aa10.77□□□□□ -0.68
MSH6-214ENST00000616033 TMEM70Q9BUB7 260 aa10.77□□□□□ -0.68
MSH6-214ENST00000616033 TMEM265A0A087WTH1 108 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 AREGP15514 252 aa10.77□□□□□ -0.69
MSH6-214ENST00000616033 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms