RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 IFI27L1Q96BM0 104 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 LOXL4Q96JB6 756 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 MDC1Q14676 2089 aaKnown RBP15.72■□□□□ 0.11
SPAST-203ENST00000615843 A0A0G2JLM5 398 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 NKX2-8O15522 239 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 HOXA3O43365 443 aaPredicted RBP15.71■□□□□ 0.11
SPAST-203ENST00000615843 CD69Q07108 199 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 GAGE13Q4V321 117 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 IGHV1-69-2A0A0G2JMI3 117 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 A0A0G2JMM0 328 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 A0A1W2PPB8 328 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 FAM90A9PA6NNJ1 464 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 KIR3DP1A8MWS1 328 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 QRFPP83859 136 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 STPG1Q5TH74 334 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 OR5AN1Q8NGI8 311 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 DNASE2BQ8WZ79 361 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 TCRBV4S1A1TA0A5B7 111 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 IGHV3-23P01764 117 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 DUTP33316 252 aaKnown RBP15.71■□□□□ 0.11
SPAST-203ENST00000615843 MORN2Q502X0 79 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 VKORC1Q9BQB6 163 aa15.71■□□□□ 0.11
SPAST-203ENST00000615843 TMEM262E9PQX1 116 aa15.71■□□□□ 0.1
SPAST-203ENST00000615843 CRYGSP22914 178 aa15.71■□□□□ 0.1
SPAST-203ENST00000615843 ERVK11-1P61568 191 aa15.71■□□□□ 0.1
SPAST-203ENST00000615843 TMEM14EPQ6UXP3 125 aa15.71■□□□□ 0.1
SPAST-203ENST00000615843 FAM90A1Q86YD7 464 aa15.71■□□□□ 0.1
SPAST-203ENST00000615843 NXT2Q9NPJ8 142 aaKnown RBP15.71■□□□□ 0.1
SPAST-203ENST00000615843 SPATA31B1PQ5VZV4 182 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 RALGAPA2Q2PPJ7 1873 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 hDV102S1A0JD36 115 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 SUMO2P61956 95 aaKnown RBP15.7■□□□□ 0.1
SPAST-203ENST00000615843 SPAARA0A1B0GVQ0 90 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 IGKCP01834 107 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 SNHG12Q9BXW3 62 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 POLR3KQ9Y2Y1 108 aaPredicted RBP15.7■□□□□ 0.1
SPAST-203ENST00000615843 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
SPAST-203ENST00000615843 FREM3P0C091 2139 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 SPSB3Q6PJ21 355 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 RASL11AQ6T310 242 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 SIGLEC12Q96PQ1 595 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 C21orf62Q9NYP8 219 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 SELENOKQ9Y6D0 94 aa15.7■□□□□ 0.1
SPAST-203ENST00000615843 PRCDQ00LT1 54 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 FAM106AQ4KMX7 169 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 BMPERQ8N8U9 685 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 IGKV1-27A0A075B6S5 117 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 IGHV3-49A0A0A0MS15 119 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 IGHV3-66A0A0C4DH42 116 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 IGKV1-5P01602 117 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 TP53BP1Q12888 1972 aaPredicted RBP15.69■□□□□ 0.1
SPAST-203ENST00000615843 RNF144BQ7Z419 303 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 PSG8Q9UQ74 426 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 FABP5P3A8MUU1 101 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 PPBPP02775 128 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 CELA3BP08861 270 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 PSG1P11464 419 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 MOB4Q9Y3A3 225 aa15.69■□□□□ 0.1
SPAST-203ENST00000615843 A0A087X0K7 114 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 IGLV3-32A0A0A0MS00 114 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 TMEM95Q3KNT9 176 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 TRAV5A0A0B4J249 113 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 FGF11Q92914 225 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 CEACAM4O75871 244 aa15.68■□□□□ 0.1
SPAST-203ENST00000615843 C20orf144Q9BQM9 153 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 SLC25A2Q9BXI2 301 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 A8MWV9 139 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 CCL21O00585 134 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 LY96Q9Y6Y9 160 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 OR13C6PQ8NH95 151 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 SEPSECSQ9HD40 501 aaKnown RBP15.67■□□□□ 0.1
SPAST-203ENST00000615843 MRPL27Q9P0M9 148 aaKnown RBP15.67■□□□□ 0.1
SPAST-203ENST00000615843 LINC00312Q9Y6C7 94 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 SCN10AQ9Y5Y9 1956 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 IGHV2OR16-5A0A0B4J2B6 119 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 GUSBP1Q15486 140 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 FBXL7Q9UJT9 491 aa15.67■□□□□ 0.1
SPAST-203ENST00000615843 DMRTC2Q8IXT2 367 aaPredicted RBP15.66■□□□□ 0.1
SPAST-203ENST00000615843 COX11Q9Y6N1 276 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 LOC105371242A0A075B767 164 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 IGHV2-5P01817 119 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 FTH1P19P0C7X4 201 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 IMMP1LQ96LU5 166 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 TFF1P04155 84 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 ESDP10768 282 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 SRSF1Q07955 248 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPAST-203ENST00000615843 MGST2Q99735 147 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 CYSLTR1Q9Y271 337 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 IGHV3OR16-12A0A075B7B8 117 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 GAGE12BA1L429 117 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 PSMB11A5LHX3 300 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 NPFFO15130 113 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 C10orf91Q5T1B1 145 aa15.66■□□□□ 0.1
SPAST-203ENST00000615843 H7C1H1 209 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 BCL6BQ8N143 479 aaPredicted RBP15.65■□□□□ 0.1
SPAST-203ENST00000615843 IGHV3OR16-8A0A075B7F1 116 aa15.65■□□□□ 0.1
SPAST-203ENST00000615843 ATP1A1-AS1Q5TC04 95 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms