RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 IGHV3-23P01764 117 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 IGHG4P01861 327 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 S100A11P31949 105 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 NUP62P37198 522 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-205ENST00000614931 ATP5IP56385 69 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-205ENST00000614931 RAB11AP62491 216 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 RPP30P78346 268 aaKnown RBP6.24□□□□□ -1.41
PCDH9-205ENST00000614931 RHOGP84095 191 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 KIAA0141Q14154 515 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-205ENST00000614931 VWC2Q2TAL6 325 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 OR10P1Q8NGE3 313 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 OR2T6Q8NHC8 308 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 RNASEH2CQ8TDP1 164 aaKnown RBP6.24□□□□□ -1.41
PCDH9-205ENST00000614931 ZNF414Q96IQ9 312 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 ATP5SQ99766 215 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 TMEM147Q9BVK8 224 aa6.24□□□□□ -1.41
PCDH9-205ENST00000614931 IGKV1D-37A0A075B6S9 117 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 PSMB11A5LHX3 300 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 M0QZ24 198 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 TRGV3P03979 118 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 PF4V1P10720 104 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 DEFA4P12838 97 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 PSMB8P28062 276 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 OPRK1P41145 380 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 RND2P52198 227 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 SUB1P53999 127 aaKnown RBP eCLIP6.23□□□□□ -1.41
PCDH9-205ENST00000614931 RUNX1Q01196 453 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 EXOSC2Q13868 293 aaKnown RBP6.23□□□□□ -1.41
PCDH9-205ENST00000614931 GAMTQ14353 236 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 TCTEX1D4Q5JR98 221 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 KLHDC1Q8N7A1 406 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 MYOZ3Q8TDC0 251 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 SCARB1Q8WTV0 552 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 CCDC140Q96MF4 163 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 ARPC5LQ9BPX5 153 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 ZNF355PQ9NSJ1 428 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 UQCC1Q9NVA1 299 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 FBXL7Q9UJT9 491 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 WDR83OSQ9Y284 106 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 PKD1L1Q8TDX9 2849 aa6.23□□□□□ -1.41
PCDH9-205ENST00000614931 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 SMCO3A2RU48 225 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 H3BUA1 57 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 CORTO00230 105 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 WIPF1O43516 503 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 BRI3O95415 125 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 CFDP00746 253 aaPredicted RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 RPLP1P05386 114 aaKnown RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 HIST1H1BP16401 226 aaKnown RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 GPX4P36969 197 aaPredicted RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 RAB9AP51151 201 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 TPPP2P59282 170 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 HBG1P69891 147 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 HBG2P69892 147 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 ATP6V1FQ16864 119 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 C15orf32Q32M92 178 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 C18orf65Q6ZTR6 163 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 OR1L6Q8NGR2 347 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 ZNF502Q8TBZ5 544 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 NPIPB3Q92617 1050 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 ACY3Q96HD9 319 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 SLC35E1Q96K37 410 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 MGST2Q99735 147 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 RSG1Q9BU20 258 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 GGACTQ9BVM4 153 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 ZNF471Q9BX82 626 aaPredicted RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 WDR61Q9GZS3 305 aaKnown RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 SH3BGRL3Q9H299 93 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 PLA2G2EQ9NZK7 142 aa6.22□□□□□ -1.41
PCDH9-205ENST00000614931 LSM4Q9Y4Z0 139 aaKnown RBP6.22□□□□□ -1.41
PCDH9-205ENST00000614931 FAM223BA6NKX1 122 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 FNDC10F2Z333 226 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 TAAR5O14804 337 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 DFFBO76075 338 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 SCAF4O95104 1147 aaKnown RBP6.21□□□□□ -1.42
PCDH9-205ENST00000614931 TRBV12-3P01733 135 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 IGHV3-11P01762 117 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 FGF7P21781 194 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 IFITM2Q01629 132 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 AKR1C1Q04828 323 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 FOXE3Q13461 319 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 ACSM6Q6P461 480 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 BTNL8Q6UX41 500 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 TMEM182Q6ZP80 229 aaPredicted RBP6.21□□□□□ -1.42
PCDH9-205ENST00000614931 TMEM144Q7Z5S9 345 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 CENPVQ7Z7K6 275 aaPredicted RBP6.21□□□□□ -1.42
PCDH9-205ENST00000614931 SLC51BQ86UW2 128 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 FAM223AQ8IWN6 122 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 ZNF491Q8N8L2 437 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 THAP8Q8NA92 274 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 HSD17B11Q8NBQ5 300 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 NECAP1Q8NC96 275 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 OR4X1Q8NH49 305 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 STOML3Q8TAV4 291 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 VN1R17PQ8TDU5 208 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 CACNG8Q8WXS5 425 aa6.21□□□□□ -1.42
PCDH9-205ENST00000614931 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms