RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 LOC102723996A0A087X1L8 192 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.73□□□□□ -0.85
CDH5-208ENST00000614547 GFRA3O60609 400 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 IGLL1P15814 213 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 CLDN18P56856 261 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 SLC35E4Q6ICL7 350 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 HARBI1Q96MB7 349 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 CCL13Q99616 98 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 MAP1LC3CQ9BXW4 147 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 FNDC4Q9H6D8 234 aaPredicted RBP9.73□□□□□ -0.85
CDH5-208ENST00000614547 KLF13Q9Y2Y9 288 aaPredicted RBP9.73□□□□□ -0.85
CDH5-208ENST00000614547 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
CDH5-208ENST00000614547 TNFSF15O95150 251 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 FXYD7P58549 80 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 OR10X1Q8NGY0 326 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
CDH5-208ENST00000614547 KIR3DL3Q8N743 410 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 hADV38S2A0JD32 116 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 CX3CL1P78423 397 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 SRSF7Q16629 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDH5-208ENST00000614547 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 NIT1Q86X76 327 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 C5orf30Q96GV9 206 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 PCED1AQ9H1Q7 454 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 CALYQ9NYX4 217 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 RALYQ9UKM9 306 aaKnown RBP9.72□□□□□ -0.85
CDH5-208ENST00000614547 V9GYV3 84 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 TRBV9A0A0B4J1U6 114 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 K7ERU9 68 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 NMUP48645 174 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 BPIFB3P59826 476 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 GAGE1Q13065 139 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 BPIFA4PQ86YQ2 179 aa9.72□□□□□ -0.85
CDH5-208ENST00000614547 ISLRO14498 428 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 CYC1P08574 325 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 HIST1H1EP10412 219 aaKnown RBP9.71□□□□□ -0.85
CDH5-208ENST00000614547 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 TANC2Q9HCD6 1990 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 DYSFO75923 2080 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 LYZP61626 148 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 TBR1Q16650 682 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 OR52E5Q8NH55 327 aa9.71□□□□□ -0.85
CDH5-208ENST00000614547 AHRRA9YTQ3 701 aa9.71□□□□□ -0.86
CDH5-208ENST00000614547 C18orf32Q8TCD1 76 aa9.71□□□□□ -0.86
CDH5-208ENST00000614547 CENPEQ02224 2701 aa9.71□□□□□ -0.86
CDH5-208ENST00000614547 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 NKX6-3A6NJ46 265 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 ZNF891A8MT65 544 aaPredicted RBP9.7□□□□□ -0.86
CDH5-208ENST00000614547 RBP4P02753 201 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 SELENOTP62341 195 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 COX19Q49B96 90 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 ZNF766Q5HY98 468 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 WDR82Q6UXN9 313 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 Q6ZR03 302 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 SNRNP40Q96DI7 357 aaKnown RBP9.7□□□□□ -0.86
CDH5-208ENST00000614547 CPAMD8Q8IZJ3 1885 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 DKK1O94907 266 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 SRSF6Q13247 344 aaKnown RBP9.7□□□□□ -0.86
CDH5-208ENST00000614547 MORN2Q502X0 79 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 LINC00470Q9BZP3 86 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 GAL3ST2Q9H3Q3 398 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 CREBBPQ92793 2442 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 TRBV6-6A0A0A6YYG2 114 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 Q0VG73 95 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 ZNF146Q15072 292 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 Q6ZSR3 168 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 ITLN1Q8WWA0 313 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
CDH5-208ENST00000614547 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 VWA1Q6PCB0 445 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 GP6Q9HCN6 339 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 OSTCQ9NRP0 149 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 MBNL3Q9NUK0 354 aaKnown RBP9.69□□□□□ -0.86
CDH5-208ENST00000614547 MGST3O14880 152 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 ARF6P62330 175 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 NUP35Q8NFH5 326 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 NAV3Q8IVL0 2385 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 SAA2-SAA4A0A096LPE2 208 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 NDUFB8O95169 186 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 SAA2P0DJI9 122 aaPredicted RBP9.69□□□□□ -0.86
CDH5-208ENST00000614547 CCL8P80075 99 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 CD177Q8N6Q3 437 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 RNF138Q8WVD3 245 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
CDH5-208ENST00000614547 PEX7O00628 323 aa9.68□□□□□ -0.86
CDH5-208ENST00000614547 IGHV1-2P23083 117 aa9.68□□□□□ -0.86
CDH5-208ENST00000614547 LINC00310P59036 64 aa9.68□□□□□ -0.86
CDH5-208ENST00000614547 NOTCH3Q9UM47 2321 aa9.68□□□□□ -0.86
CDH5-208ENST00000614547 ADGRG4Q8IZF6 3080 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms